RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NHLH1Q02575 133 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 SKP2Q13309 424 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF573Q86YE8 665 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 H1FOOQ8IZA3 346 aaPredicted RBP6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OIT3Q8WWZ8 545 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 GMPPAQ96IJ6 420 aaPredicted RBP6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 OXGR1Q96P68 337 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 DOK5Q9P104 306 aa6.55□□□□□ -1.36
UBE2D3-224ENST00000508474 MYADML2A6NDP7 307 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 AQP7P3A6NL99 342 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 SH2D1BO14796 132 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 RECKO95980 971 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 TRGC2P03986 189 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 ADH4P08319 380 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 SELEP16581 610 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 LAMTOR1Q6IAA8 161 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 LIAT1Q6ZQX7 453 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 MMP25Q9NPA2 562 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 C20orf141Q9NUB4 165 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 KCNE5Q9UJ90 142 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 BCORQ6W2J9 1755 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 H3BP45 60 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 DNASE2O00115 360 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 CYC1P08574 325 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 PPOXP50336 477 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 DYNLT3P51808 116 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 ARL16Q0P5N6 197 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 DCAF12L2Q5VW00 463 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 DHRS11Q6UWP2 260 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 CA13Q8N1Q1 262 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 VN1R17PQ8TDU5 208 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 SDHCQ99643 169 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF391Q9UJN7 358 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 BOKQ9UMX3 212 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 NOSIPQ9Y314 301 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 KCNE3Q9Y6H6 103 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 HS3ST1O14792 307 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 ANKRD34CP0C6C1 535 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 CYBAP13498 195 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 GDF1P27539 372 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 FOLR3P41439 243 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 ASCL1P50553 236 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 SUMO3P55854 103 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 RPS15P62841 145 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 TMEM267Q0VDI3 215 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 OR4A47Q6IF82 309 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 SPNS2Q8IVW8 549 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 FAAP24Q9BTP7 215 aa6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 WDR61Q9GZS3 305 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-224ENST00000508474 LINC01553A4QN01 128 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 PITX3O75364 302 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 CBR3O75828 277 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 NKX2-2O95096 273 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 CFIP05156 583 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 GUSBP08236 651 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 GPR12P47775 334 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 EWSR1Q01844 656 aaKnown RBP eCLIP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 PAX5Q02548 391 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 ABHD17BQ5VST6 288 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 ZNF770Q6IQ21 691 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 C12orf54Q6X4T0 127 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 TMEM251Q8N6I4 163 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 RGP1Q92546 391 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 ASB16Q96NS5 453 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 MAP1LC3CQ9BXW4 147 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 NPDC1Q9NQX5 325 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 MRM2Q9UI43 246 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 SERTM2A0A1B0GWG4 89 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 GLULP15104 373 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 IL3RAP26951 378 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 BRS3P32247 399 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 PNLIPRP2P54317 469 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 RHOBP62745 196 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 B4GALNT1Q00973 533 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 MPV17LQ2QL34 196 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 Q5BKY6 102 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 FAM219BQ5XKK7 198 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 BPIFA4PQ86YQ2 179 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 OR1L6Q8NGR2 347 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 WFDC5Q8TCV5 224 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 AQP10Q96PS8 301 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 CNTD2Q9H8S5 307 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 SLC52A3Q9NQ40 469 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 GDE1Q9NZC3 331 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 ST6GALNAC2Q9UJ37 374 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 DDX60LQ5H9U9 1706 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 SCN4AP35499 1836 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 FAM221AA4D161 298 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 BMPR1BO00238 502 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 CDC42EP2O14613 210 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 CDKN2AP42771 156 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 FUT7Q11130 342 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 FAM26DQ5JW98 314 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 OR11L1Q8NGX0 322 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 EDARADDQ8WWZ3 215 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 DPF1Q92782 380 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 EMC6Q9BV81 110 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 GPR61Q9BZJ8 451 aa6.53□□□□□ -1.36
UBE2D3-224ENST00000508474 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms