RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CNIH1O95406 144 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TK1P04183 234 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 IGF1P05019 195 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 BPGMP07738 259 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TROVE2P10155 538 aaKnown RBP eCLIP5.55□□□□□ -1.52
VCAN-207ENST00000507162 TMEM11P17152 192 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TNFRSF1BP20333 461 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 CRABP1P29762 137 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 CDKN2AP42771 156 aaKnown RBP5.55□□□□□ -1.52
VCAN-207ENST00000507162 GPM6AP51674 278 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 ABCE1P61221 599 aaKnown RBP5.55□□□□□ -1.52
VCAN-207ENST00000507162 FHL1Q13642 323 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TIGD6Q17RP2 521 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 SLC36A3Q495N2 470 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 ACSM6Q6P461 480 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TMEM65Q6PI78 240 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 DRAM2Q6UX65 266 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 ZBTB49Q6ZSB9 765 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 MSANTD1Q6ZTZ1 278 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 PATL1Q86TB9 770 aaKnown RBP5.55□□□□□ -1.52
VCAN-207ENST00000507162 ANKRD13BQ86YJ7 626 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TIGD4Q8IY51 512 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 OR9I1Q8NGQ6 314 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 SGK3Q96BR1 496 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 ANAPC16Q96DE5 110 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 REEP6Q96HR9 211 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 APOPT1Q96IL0 206 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 ZNF714Q96N38 554 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 HIST1H2AAQ96QV6 131 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TMEM133Q9H2Q1 129 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TMEM38AQ9H6F2 299 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 OPA3Q9H6K4 179 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 CENPMQ9NSP4 180 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 PNPOQ9NVS9 261 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 FAM53CQ9NYF3 392 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 RAP2CQ9Y3L5 183 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 IER3IP1Q9Y5U9 82 aa5.55□□□□□ -1.52
VCAN-207ENST00000507162 TMEM238LA0A1B0GVL6 79 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 OR6C68A6NDL8 312 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 NCBP2LA6PVI3 153 aaKnown RBP5.54□□□□□ -1.52
VCAN-207ENST00000507162 I3L521 148 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 SDHDO14521 159 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 RBP4P02753 201 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 SHBGP04278 402 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 ANXA2P07355 339 aaKnown RBP5.54□□□□□ -1.52
VCAN-207ENST00000507162 OR8U9P0C7N5 309 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 ISL1P61371 349 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 PITPNAQ00169 270 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 PRDX4Q13162 271 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 RBM39Q14498 530 aaKnown RBP5.54□□□□□ -1.52
VCAN-207ENST00000507162 TPTE2P1Q5T6R2 138 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 DNM1P34Q6PK57 102 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 BAIAP2L2Q6UXY1 529 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 GDPD3Q7L5L3 318 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 MSRB3Q8IXL7 192 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 NRMQ8IXM6 262 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 BATF2Q8N1L9 274 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 LILRB2Q8N423 598 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 RNF152Q8N8N0 203 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 ASCC1Q8N9N2 400 aaKnown RBP5.54□□□□□ -1.52
VCAN-207ENST00000507162 ZNF596Q8TC21 504 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 OR5P3Q8WZ94 311 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 LZICQ8WZA0 190 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 PKNOX2Q96KN3 472 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 HRASLS5Q96KN8 279 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 ZNF488Q96MN9 340 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 COPS4Q9BT78 406 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 PARD6BQ9BYG5 372 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 C20orf27Q9GZN8 174 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 FGF23Q9GZV9 251 aaPredicted RBP5.54□□□□□ -1.52
VCAN-207ENST00000507162 ALX4Q9H161 411 aaPredicted RBP5.54□□□□□ -1.52
VCAN-207ENST00000507162 IKZF5Q9H5V7 419 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 CYB5R1Q9UHQ9 305 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 B9D1Q9UPM9 204 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 VSIG4Q9Y279 399 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 MPC1Q9Y5U8 109 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
VCAN-207ENST00000507162 DNAH6Q9C0G6 4158 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 ZNF732B4DXR9 585 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 LINC01619G3V211 115 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 TOR1AO14656 332 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 TYROBPO43914 113 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 MMP23AO75900 390 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 IDO1P14902 403 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 VDAC1P21796 283 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 PPIBP23284 216 aaKnown RBP5.53□□□□□ -1.52
VCAN-207ENST00000507162 CASQ1P31415 396 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 DCTDP32321 178 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 CEACAM3P40198 252 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 RPS27P42677 84 aaKnown RBP5.53□□□□□ -1.52
VCAN-207ENST00000507162 GPR12P47775 334 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 SLC1A6P48664 564 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 BDH1Q02338 343 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 MFGE8Q08431 387 aaPredicted RBP5.53□□□□□ -1.52
VCAN-207ENST00000507162 EIF2B1Q14232 305 aaKnown RBP5.53□□□□□ -1.52
VCAN-207ENST00000507162 EDDM3AQ14507 147 aa5.53□□□□□ -1.52
VCAN-207ENST00000507162 SMIM21Q3B7S5 101 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms