RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 DAOAP59103 153 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 MEF2CQ06413 473 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 SPAG1Q07617 926 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 FBXL19-AS1Q494R0 122 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 APOBEC3HQ6NTF7 200 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 ULK3Q6PHR2 472 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 VTCN1Q7Z7D3 282 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 NT5DC3Q86UY8 548 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 ITLN2Q8WWU7 325 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 TFGQ92734 400 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 KIAA1143Q96AT1 154 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 ISG20Q96AZ6 181 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 OR2S2Q9NQN1 319 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 RABL2AQ9UBK7 228 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 PEF1Q9UBV8 284 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 KLF12Q9Y4X4 402 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 R4GN34 69 aa1.82□□□□□ -2.12
TOPBP1-204ENST00000505804 A0A1W2PRF3 423 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 A0A1W2PRM7 423 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 GOLGA6L4A6NEF3 574 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 CENPXA8MT69 81 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 ZNF701M0R085 212 aaPredicted RBP1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 KCNK2O95069 426 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 IGHG2P01859 326 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 HLA-GP17693 338 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 PEX19P40855 299 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 ACOT2P49753 483 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 HCCSP53701 268 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 FMODQ06828 376 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 ST3GAL4Q11206 333 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 DOC2AQ14183 400 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 THOC7Q6I9Y2 204 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 EPGNQ6UW88 154 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 SLC35D2Q76EJ3 337 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 FA2HQ7L5A8 372 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 OR5T3Q8NGG3 340 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 OR4C13Q8NGP0 309 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 ORAOV1Q8WV07 137 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 OR2V2Q96R30 315 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 PLA2G12AQ9BZM1 189 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 RGCCQ9H4X1 137 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 DUSP21Q9H596 190 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 INIPQ9NRY2 104 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 ASF1BQ9NVP2 202 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 VWA8A3KMH1 1905 aa1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 BAZ1BQ9UIG0 1483 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-204ENST00000505804 PLXNB3Q9ULL4 1909 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 OR4Q2P0C623 313 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 GNRHRP30968 328 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 CSKP41240 450 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 TUFMP49411 452 aaKnown RBP1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 PSMB2P49721 201 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 SLC9A3R2Q15599 337 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 PYDC2Q56P42 97 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 TTC32Q5I0X7 151 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 LDLRAD2Q5SZI1 272 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 CPTPQ5TA50 214 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 HCP5Q6MZN7 132 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 WDR59Q6PJI9 974 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 USP50Q70EL3 339 aaPredicted RBP1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 TRMT10CQ7L0Y3 403 aaKnown RBP1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 ZDHHC22Q8N966 263 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 ZFP62Q8NB50 900 aaPredicted RBP1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 FBXO36Q8NEA4 188 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 OR6K6Q8NGW6 343 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 OR8K3Q8NH51 312 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 RNF170Q96K19 258 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 PEBP4Q96S96 227 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 ANP32EQ9BTT0 268 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 API5Q9BZZ5 524 aaKnown RBP1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 IL22Q9GZX6 179 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 CHRNA10Q9GZZ6 450 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 FAM60AQ9NP50 221 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 ORC6Q9Y5N6 252 aa1.8□□□□□ -2.12
TOPBP1-204ENST00000505804 MIA3Q5JRA6 1907 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 GOLGA6L7A0A1B0GV03 622 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 TRAPPC6AO75865 159 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 SRMP19623 302 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 MSR1P21757 451 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 IVDP26440 423 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 KLF3P57682 345 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 SLC35B1P78383 322 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 LAMTOR4Q0VGL1 99 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 TRDNQ13061 729 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 LIN9Q5TKA1 542 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 ZNF660Q6AZW8 331 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 PRNTQ86SH4 94 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 ZCCHC13Q8WW36 166 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 FXYD5Q96DB9 178 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 ZNF649Q9BS31 505 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 MRPL20Q9BYC9 149 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 DSN1Q9H410 356 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 KIR3DX1Q9H7L2 352 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 CYP3A43Q9HB55 503 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 CRLF2Q9HC73 371 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 ABCB9Q9NP78 766 aa1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 RPRD1BQ9NQG5 326 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-204ENST00000505804 TMEM38BQ9NVV0 291 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms