RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZNF141Q15928 474 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 HEPN1Q6WQI6 88 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF248Q8NDW4 579 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 OR5D14Q8NGL3 314 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 BAHD1Q8TBE0 780 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 NT5CQ8TCD5 201 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 TCTN2Q96GX1 697 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 PBOV1Q9GZY1 135 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 GPR84Q9NQS5 396 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 NPIPA1Q9UND3 350 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 B3GALT5Q9Y2C3 310 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 MEMO1Q9Y316 297 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 KNTC1P50748 2209 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 LDLRAD4O15165 306 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 PLRG1O43660 514 aaKnown RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 MELTFP08582 738 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 OR5AC1P0C628 307 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H1DP16402 221 aaKnown RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 HLA-GP17693 338 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 FGF8P55075 233 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 RAB38P57729 211 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 STARD6P59095 220 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 RAB11AP62491 216 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 SSBP1Q04837 148 aaKnown RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 SRSF4Q08170 494 aaKnown RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 PCK2Q16822 640 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 TEX30Q5JUR7 227 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 MAMDC2Q7Z304 686 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF440Q8IYI8 595 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 RNASE11Q8TAA1 199 aaKnown RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 ASB13Q8WXK3 278 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 SLAMF6Q96DU3 332 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-208ENST00000504387 WWTR1Q9GZV5 400 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 LYRM4Q9HD34 91 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 SLC17A5Q9NRA2 495 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 SDHAF3Q9NRP4 125 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 PLA2G3Q9NZ20 509 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 WNT16Q9UBV4 365 aa6.72□□□□□ -1.33
NEDD9-208ENST00000504387 TMED7-TICAM2A0A0A6YYA0 188 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 IGLV1-36A0A0B4J1U3 117 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 CXorf51AA0A1B0GTR3 108 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 CDC14BO60729 498 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 SEMA4FO95754 770 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 HLA-HP01893 362 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 BGLAPP02818 100 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 GP1BBP13224 206 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 CD33P20138 364 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 LBX1P52954 281 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 SSTP61278 116 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 FOXK1P85037 733 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 RHEBQ15382 184 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 NSDHLQ15738 373 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 UBE2V2Q15819 145 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 TAF9Q16594 264 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 ABCA11PQ4W5N1 156 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 C1orf140Q5VVS0 124 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM268Q5VZI3 342 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM92Q6UXU6 159 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 FBXW12Q6X9E4 464 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF429Q86V71 674 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 SGPP2Q8IWX5 399 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 OR10AD1Q8NGE0 317 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 FLVCR1-AS1Q8TAF5 88 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 HAS2Q92819 552 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 HDGFL3Q9Y3E1 203 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 OBSL1O75147 1896 aa6.71□□□□□ -1.33
NEDD9-208ENST00000504387 TRBV6-7A0A0A0MS04 114 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 BORCS7-ASMTA0A0B4J1R7 106 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 SMCO3A2RU48 225 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 OR5H15A6NDH6 313 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 OR5H1A6NKK0 313 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 NUDT19A8MXV4 375 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 APOBEC1P41238 236 aaKnown RBP6.71□□□□□ -1.34
NEDD9-208ENST00000504387 BIDP55957 195 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 RND3P61587 244 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-208ENST00000504387 PNLIPRP3Q17RR3 467 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 SLC25A24Q6NUK1 477 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 ZNF283Q8N7M2 679 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 C11orf40Q8WZ69 217 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 FAAP24Q9BTP7 215 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 NKX2-4Q9H2Z4 354 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 PLEKHJ1Q9NW61 149 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 PPP4R1LQ9P1A2 415 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 GNG13Q9P2W3 67 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 GAB2Q9UQC2 676 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 STARD10Q9Y365 291 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 A6NNC1 897 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 EREGO14944 169 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 FOXS1O43638 330 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 HIST1H1BP16401 226 aaKnown RBP6.71□□□□□ -1.34
NEDD9-208ENST00000504387 GPR3P46089 330 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 ELOBQ15370 118 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 MPV17LQ2QL34 196 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 Q6ZS52 159 aa6.71□□□□□ -1.34
NEDD9-208ENST00000504387 C19orf47Q8N9M1 422 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms