RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 VAX2Q9UIW0 290 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 RAB22AQ9UL26 194 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 ORC6Q9Y5N6 252 aa2.78□□□□□ -1.96
TRAPPC13-205ENST00000504243 SCN1AP35498 2009 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 IGKV1D-17A0A075B6S4 117 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 TRAV8-7A0A075B6U6 113 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 FAM240AA0A1B0GVK7 77 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 ERICH2A1L162 156 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZNF98A6NK75 572 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 IQCF5A8MTL0 148 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 A8MUU9 505 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 PRAMEF26H0Y7S4 382 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 ENSAO43768 121 aaKnown RBP2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 IGKV1-17P01599 117 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 IL3RAP26951 378 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 HTR2CP28335 458 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 GNRHRP30968 328 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 MAP3K7CLP57077 242 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 GRB2P62993 217 aaKnown RBP2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 GPR176Q14439 515 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 MED27Q6P2C8 311 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 PRSS54Q6PEW0 395 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 PDPNQ86YL7 162 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 STK40Q8N2I9 435 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 SLC25A29Q8N8R3 303 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 ST20-AS1Q8NBB2 130 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 APCDD1LQ8NCL9 501 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 CACNG8Q8WXS5 425 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZFP3Q96NJ6 502 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 C1orf50Q9BV19 199 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 BBS2Q9BXC9 721 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 NRBP2Q9NSY0 501 aa2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZCCHC6Q5VYS8 1495 aaKnown RBP2.77□□□□□ -1.97
TRAPPC13-205ENST00000504243 NPHP4O75161 1426 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 CCL15-CCL14A0A0B4J2E2 113 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 TVP23AA6NH52 213 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 RFXANKO14593 260 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 NDUFS5O43920 106 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 OR5AL1P0C617 328 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 CCL2P13500 99 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 ATP5J2P56134 94 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 MLF1P58340 268 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 TNNC1P63316 161 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 IL5RAQ01344 420 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 CCL15Q16663 113 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 PDPK2PQ6A1A2 396 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 EPGNQ6UW88 154 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 CASP12Q6UXS9 341 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 KRT222Q8N1A0 295 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZCCHC24Q8N2G6 241 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 MIR7-3HGQ8N6C7 128 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZFAND1Q8TCF1 268 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZNF721Q8TF20 911 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 YIPF6Q96EC8 236 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 ARL5BQ96KC2 179 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 LLPHQ9BRT6 129 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 HINT2Q9BX68 163 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 FRMD8P1Q9BZ68 369 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 PARVGQ9HBI0 331 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZNF302Q9NR11 478 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 UBAP1Q9NZ09 502 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 RWDD2AQ9UIY3 292 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 C15orf41Q9Y2V0 281 aa2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 RBMX2Q9Y388 322 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 V9GYY5 206 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-205ENST00000504243 IGHV6-1A0A0B4J1U7 121 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 GSTTP1A0A1W2PQM5 241 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 MFNGO00587 321 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 GMDSO60547 372 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 CNMDO75829 334 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 HLA-GP17693 338 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 NTF3P20783 257 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 CCNOP22674 350 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 PAX6P26367 422 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 MPV17P39210 176 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 GDI2P50395 445 aaKnown RBP2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 PMVKQ15126 192 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 TAL2Q16559 108 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 TTC32Q5I0X7 151 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 ERICH5Q6P6B1 374 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 BBS7Q8IWZ6 715 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 CD302Q8IX05 232 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 FAM9CQ8IZT9 166 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 SLC35G3Q8N808 338 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 OR6N2Q8NGY6 317 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 LRRC45Q96CN5 670 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 C8orf76Q96K31 380 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 MRPL20Q9BYC9 149 aaKnown RBP2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 COA1Q9GZY4 146 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 CHRNA10Q9GZZ6 450 aa2.75□□□□□ -1.97
TRAPPC13-205ENST00000504243 JCADQ9P266 1359 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 ANKRD20A5PA0PJZ0 165 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 PRMT5O14744 637 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 OR7C2O60412 319 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 ALOX12BO75342 701 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 LIPCP11150 499 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZNF3P17036 446 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 RGS6P49758 472 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms