RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 RPS2P15880 293 aaKnown RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 TNFRSF1BP20333 461 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ADH6P28332 368 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 SHC1P29353 583 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 NTSP30990 170 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 MPIP34949 423 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 MAGEB1P43366 347 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 GPR4P46093 362 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 HTR5AP47898 357 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 CDX1P47902 265 aaPredicted RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 KCNJ3P48549 501 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 FABP6P51161 128 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 P2RX1P51575 399 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 LUMP51884 338 aaPredicted RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 MANFP55145 182 aaKnown RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 GFRA1P56159 465 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 TAS2R20P59543 309 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 SNRPEP62304 92 aaKnown RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 BSPH1Q075Z2 132 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 FABP9Q0Z7S8 132 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 CBFBQ13951 182 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 FAM189A2Q15884 450 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 SYPL1Q16563 259 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 HAGHQ16775 308 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 SPDYE7PQ495Y7 208 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 C4orf46Q504U0 113 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ANKRD39Q53RE8 183 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ZNF385BQ569K4 471 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 RNASE10Q5GAN6 216 aaKnown RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 SFRP5Q5T4F7 317 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 RAET1LQ5VY80 246 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR10K2Q6IF99 312 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ZNF613Q6PF04 617 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 FIGNL1Q6PIW4 674 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ARL9Q6T311 187 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 SLC22A25Q6T423 547 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ETV3LQ6ZN32 361 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ADGRE4PQ86SQ3 457 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 RANBP3LQ86VV4 465 aaPredicted RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 CBLN2Q8IUK8 224 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 CMTM4Q8IZR5 234 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 FBXL14Q8N1E6 418 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR2L13Q8N349 312 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 IQCF1Q8N6M8 205 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 TMEM229BQ8NBD8 167 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR8G5Q8NG78 346 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR56B1Q8NGI3 324 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR5M1Q8NGP8 315 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR52I2Q8NH67 350 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 OR6X1Q8NH79 312 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 ZNF417Q8TAU3 575 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 FNDC9Q8TBE3 224 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 C10orf105Q8TEF2 133 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 PTX4Q96A99 478 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 R3HDM4Q96D70 268 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 AMDHD1Q96NU7 426 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 TEAD3Q99594 435 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 PHB2Q99623 299 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 VRK1Q99986 396 aaPredicted RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 NUDT16L1Q9BRJ7 211 aaKnown RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 G6PC3Q9BUM1 346 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 PBDC1Q9BVG4 233 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 C1QTNF6Q9BXI9 259 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 NMES1Q9C002 83 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 TINAGL1Q9GZM7 467 aaPredicted RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 METTL9Q9H1A3 318 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 GLIPR2Q9H4G4 154 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 AUNIPQ9H7T9 357 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 TREM1Q9NP99 234 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 GAR1Q9NY12 217 aaKnown RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 NKIRAS2Q9NYR9 191 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 GHRLQ9UBU3 117 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 C19orf53Q9UNZ5 99 aaPredicted RBP4.49□□□□□ -1.69
HTT-202ENST00000502820 FOXJ3Q9UPW0 622 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 EMC9Q9Y3B6 208 aa4.49□□□□□ -1.69
HTT-202ENST00000502820 USF3Q68DE3 2245 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 A0A087WWC5 75 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 IGHV4-61A0A0C4DH41 118 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 TMEM72A0PK05 275 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 ELOA3DA6NLF2 546 aaPredicted RBP4.48□□□□□ -1.69
HTT-202ENST00000502820 C17orf51A8MQB3 221 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 M0QZK8 103 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 EMC8O43402 210 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 FADS1O60427 444 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 ZIC3O60481 467 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 GGCTO75223 188 aaKnown RBP4.48□□□□□ -1.69
HTT-202ENST00000502820 CBR3O75828 277 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 IGF2P01344 180 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 OPN1LWP04000 364 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 CD5P06127 495 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 GUSBP08236 651 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 HOXB5P09067 269 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 OR4E1P0C645 316 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 ADCYAP1P18509 176 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 RAB5AP20339 215 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 HOXA5P20719 270 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 CXCR1P25024 350 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 CD34P28906 385 aa4.48□□□□□ -1.69
HTT-202ENST00000502820 TACR3P29371 465 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms