RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 ZNF879B4DU55 563 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 MPZL2O60487 215 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ENTPD6O75354 484 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 GATBO75879 557 aaKnown RBP8.84□□□□□ -0.99
CDK11A-222ENST00000498810 SULT1C4O75897 302 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 NXPH2O95156 264 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 SERPINA3P01011 423 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 FSHBP01225 129 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 LHBP01229 141 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 UBCP0CG48 685 aaKnown RBP8.84□□□□□ -0.99
CDK11A-222ENST00000498810 PPIAL4GP0DN37 164 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 HAAOP46952 286 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ACTA2P62736 377 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ACTG2P63267 376 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ZSCAN26Q16670 478 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 BRD3OSQ6XYD6 125 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ZNF841Q6ZN19 808 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ZNF573Q86YE8 665 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 MRPL41Q8IXM3 137 aaKnown RBP8.84□□□□□ -0.99
CDK11A-222ENST00000498810 FAM216AQ8WUB2 273 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 GATAD2BQ8WXI9 593 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 PPP1R14AQ96A00 147 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 SLC25A28Q96A46 364 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 SEH1LQ96EE3 360 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 MED30Q96HR3 178 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 Q96MT0 163 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 WDR13Q9H1Z4 485 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 ACOXLQ9NUZ1 547 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 KAAG1Q9UBP8 84 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 SLC25A10Q9UBX3 287 aaPredicted RBP8.84□□□□□ -0.99
CDK11A-222ENST00000498810 PCDHGB1Q9Y5G3 927 aa8.84□□□□□ -0.99
CDK11A-222ENST00000498810 SVEP1Q4LDE5 3571 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 LOC107986453A0A1B0GWG9 222 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 ANKRD61A6NGH8 418 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 DNAJC9-AS1A6NH13 148 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 OR2AT4A6NND4 320 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 DHRS7CA6NNS2 312 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 J3QT63 122 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 SLC1A7O00341 560 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 DLGAP1O14490 977 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 RHBDL1O75783 438 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 PLATP00750 562 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 SFTPBP07988 381 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 HTR1AP08908 422 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 CFHR2P36980 270 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 ARF6P62330 175 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 UBA52P62987 128 aaKnown RBP8.83□□□□□ -1
CDK11A-222ENST00000498810 EFNB1P98172 346 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 BLMHQ13867 455 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 PDCD1Q15116 288 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 CNN3Q15417 329 aaKnown RBP8.83□□□□□ -1
CDK11A-222ENST00000498810 KLF17Q5JT82 389 aaPredicted RBP8.83□□□□□ -1
CDK11A-222ENST00000498810 STUMQ69YW2 141 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 CATSPERDQ86XM0 798 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 C11orf53Q8IXP5 236 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 BATF2Q8N1L9 274 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 CCDC54Q8NEL0 328 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 LHX4Q969G2 390 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 BORCS8Q96FH0 119 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 WDFY2Q96P53 400 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 DNTTIP1Q9H147 329 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 TNFRSF19Q9NS68 423 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 OR14J1Q9UGF5 321 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 RPUSD1Q9UJJ7 312 aaKnown RBP8.83□□□□□ -1
CDK11A-222ENST00000498810 V9GYS6 101 aa8.83□□□□□ -1
CDK11A-222ENST00000498810 A0A1B0GW55 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 J3QLW9 94 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 SRSF10O75494 262 aaKnown RBP8.82□□□□□ -1
CDK11A-222ENST00000498810 CYB5AP00167 134 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L2P0CJ85 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L3P0CJ86 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L4P0CJ87 422 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L5P0CJ88 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L6P0CJ89 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L7P0CJ90 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 SELLP14151 372 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 ZNF19P17023 458 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 SNRPGP62308 76 aaKnown RBP8.82□□□□□ -1
CDK11A-222ENST00000498810 ELF3P78545 371 aaPredicted RBP8.82□□□□□ -1
CDK11A-222ENST00000498810 PAX2Q02962 417 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 ZNF91Q05481 1191 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4L9Q6RFH8 374 aaPredicted RBP8.82□□□□□ -1
CDK11A-222ENST00000498810 FIP1L1Q6UN15 594 aaKnown RBP8.82□□□□□ -1
CDK11A-222ENST00000498810 VMO1Q7Z5L0 202 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 PDZD9Q8IXQ8 264 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 FAM185AQ8N0U4 392 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 BCL6BQ8N143 479 aaPredicted RBP8.82□□□□□ -1
CDK11A-222ENST00000498810 ACBD7Q8N6N7 88 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 ZNF676Q8N7Q3 588 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 C3orf56Q8N813 242 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 OR14K1Q8NGZ2 314 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 AQP3Q92482 292 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 RORBQ92753 470 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 MBOAT4Q96T53 435 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 OR51I2Q9H344 312 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 CNTD2Q9H8S5 307 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 DUX4Q9UBX2 424 aa8.82□□□□□ -1
CDK11A-222ENST00000498810 CAB39Q9Y376 341 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms