RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-B-255ENST00000498007 PHF1O43189 567 aaPredicted RBP16.53■□□□□ 0.24
HLA-B-255ENST00000498007 ADAM20O43506 726 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 CD2P06729 351 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 WNT2P09544 360 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 PRKACBP22694 351 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 MAP2K4P45985 399 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 PITPNBP48739 271 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 RBP2P50120 134 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 DVL1P1P54792 670 aaPredicted RBP16.53■□□□□ 0.24
HLA-B-255ENST00000498007 YIF1BQ5BJH7 314 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 PARP16Q8N5Y8 322 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 OR5D14Q8NGL3 314 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 TMEM106AQ96A25 262 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 TMEM186Q96B77 213 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 SPSB1Q96BD6 273 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 SPACA5Q96QH8 159 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 RASSF4Q9H2L5 321 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 HIF1ANQ9NWT6 349 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 TAS2R4Q9NYW5 299 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 LRCH1Q9Y2L9 728 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 MALRD1Q5VYJ5 2156 aa16.53■□□□□ 0.24
HLA-B-255ENST00000498007 MTORP42345 2549 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 SULT1B1O43704 296 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 FOXH1O75593 365 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 INMTO95050 263 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 HCKP08631 526 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 MUC1P15941 1255 aaPredicted RBP16.52■□□□□ 0.24
HLA-B-255ENST00000498007 ZFP36P26651 326 aaKnown RBP16.52■□□□□ 0.24
HLA-B-255ENST00000498007 POU3F4P49335 361 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 ATP1B3P54709 279 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 GNB2P62879 340 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 BDH1Q02338 343 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 LHFPL2Q6ZUX7 228 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 POC1AQ8NBT0 407 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 DNAAF1Q8NEP3 725 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 OR5T2Q8NGG2 359 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 RFT1Q96AA3 541 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 TMIGD2Q96BF3 282 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 SSBP3Q9BWW4 388 aaPredicted RBP16.52■□□□□ 0.24
HLA-B-255ENST00000498007 PKIBQ9C010 78 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 CTSZQ9UBR2 303 aa16.52■□□□□ 0.24
HLA-B-255ENST00000498007 NSD1Q96L73 2696 aaPredicted RBP16.52■□□□□ 0.23
HLA-B-255ENST00000498007 TRAV20A0A0B4J274 112 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 TMPRSS2O15393 492 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 TFF1P04155 84 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 HSMCR30P0CW71 290 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 PGA5P0DJD9 388 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 MPZP25189 248 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 MTCP1P56278 107 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 GABARAPL2P60520 117 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 IL24Q13007 206 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 STUMQ69YW2 141 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 SLC25A26Q70HW3 274 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 SLAMF9Q96A28 289 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 C12orf43Q96C57 262 aaKnown RBP16.51■□□□□ 0.23
HLA-B-255ENST00000498007 CCL13Q99616 98 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 NEK6Q9HC98 313 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 NLKQ9UBE8 527 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 CLN8Q9UBY8 286 aa16.51■□□□□ 0.23
HLA-B-255ENST00000498007 SVEP1Q4LDE5 3571 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 TRBV5-5A0A0J9YX44 114 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 A0A1B0GW55 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 NKX6-3A6NJ46 265 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 NDUFA2O43678 99 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 NXPH2O95156 264 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L2P0CJ85 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L3P0CJ86 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L4P0CJ87 422 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L5P0CJ88 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L6P0CJ89 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L7P0CJ90 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 RAB3AP20336 220 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 RPS11P62280 158 aaKnown RBP eCLIP16.5■□□□□ 0.23
HLA-B-255ENST00000498007 ACSM1Q08AH1 577 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 Q499Y3 187 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 ASPHD2Q6ICH7 369 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4L9Q6RFH8 374 aaPredicted RBP16.5■□□□□ 0.23
HLA-B-255ENST00000498007 IL17RELQ6ZVW7 336 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 OR51A2Q8NGJ7 313 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 OR5D18Q8NGL1 313 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 ORAI1Q96D31 301 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 OR14A2Q96R54 314 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 DUX4Q9UBX2 424 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 OR5V1Q9UGF6 321 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 HIVEP2P31629 2446 aa16.5■□□□□ 0.23
HLA-B-255ENST00000498007 OR2AT4A6NND4 320 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 KIAA1324LA8MWY0 1029 aaPredicted RBP16.49■□□□□ 0.23
HLA-B-255ENST00000498007 A8MXK9 166 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 PPP3R1P63098 170 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 TBCEQ15813 527 aaPredicted RBP16.49■□□□□ 0.23
HLA-B-255ENST00000498007 CR1LQ2VPA4 569 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 SMIM21Q3B7S5 101 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 DCAF12L2Q5VW00 463 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 RNF144BQ7Z419 303 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 FAM216BQ8N7L0 139 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 UFD1Q92890 307 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 CEP19Q96LK0 163 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 NRIP2Q9BQI9 281 aa16.49■□□□□ 0.23
HLA-B-255ENST00000498007 TMED9Q9BVK6 235 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms