RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SLC25A30Q5SVS4 291 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 NCR3LG1Q68D85 454 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 C1orf122Q6ZSJ8 110 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 LDLRAD3Q86YD5 345 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 SGMS2Q8NHU3 365 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 NPRL2Q8WTW4 380 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 RORBQ92753 470 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 PPP1R14AQ96A00 147 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 NRIP2Q9BQI9 281 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
HDAC4-213ENST00000496347 UNKLQ9H9P5 680 aaKnown RBP12.94□□□□□ -0.34
HDAC4-213ENST00000496347 A0A1W2PQ09 198 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 SNTNA6NMZ2 147 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 SYT7O43581 403 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-213ENST00000496347 GATBO75879 557 aaKnown RBP12.93□□□□□ -0.34
HDAC4-213ENST00000496347 NDUFB7P17568 137 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 GABRA2P47869 451 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 SNRPGP62308 76 aaKnown RBP12.93□□□□□ -0.34
HDAC4-213ENST00000496347 MEDAGQ5VYS4 303 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 SHISA2Q6UWI4 295 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 ACP7Q6ZNF0 438 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 TMEM185AQ8NFB2 350 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 C10orf35Q96D05 121 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 PKIBQ9C010 78 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 METTL8Q9H825 291 aaKnown RBP12.93□□□□□ -0.34
HDAC4-213ENST00000496347 GPR173Q9NS66 373 aa12.93□□□□□ -0.34
HDAC4-213ENST00000496347 CAB39Q9Y376 341 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-213ENST00000496347 LOC107986453A0A1B0GWG9 222 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 E9PQ18 207 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 SLC1A7O00341 560 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
HDAC4-213ENST00000496347 BLMHQ13867 455 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 DMRTC1Q5HYR2 192 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 CBR4Q8N4T8 237 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 ZNF561Q8N587 486 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 ZNRF1Q8ND25 227 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 HES4Q9HCC6 221 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 SIRT7Q9NRC8 400 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 GNG8Q9UK08 70 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 MAB21L2Q9Y586 359 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 PCDHGB1Q9Y5G3 927 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 MMP24Q9Y5R2 645 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 DSCAML1Q8TD84 2053 aa12.92□□□□□ -0.34
HDAC4-213ENST00000496347 TRRAPQ9Y4A5 3859 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 A0A0U1RQK1 487 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 A0A1B0GUS0 222 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 POM121CA8CG34 1229 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 SYNGR1O43759 233 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 NXPH2O95156 264 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 TFF1P04155 84 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 FBP1P09467 338 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 ACTA2P62736 377 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 ACTG2P63267 376 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 ZNF85Q03923 595 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 IL24Q13007 206 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 OCLNQ16625 522 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 Q8N7P7 452 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 OR4F5Q8NH21 305 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 TBC1D15Q8TC07 691 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 DYRK2Q92630 601 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 RNFT2Q96EX2 444 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 C9orf16Q9BUW7 83 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 ADI1Q9BV57 179 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 CHIAQ9BZP6 476 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 FAM96BQ9Y3D0 163 aa12.91□□□□□ -0.34
HDAC4-213ENST00000496347 A0A1W2PPH5 198 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 RNASEK-C17orf49H0YIS7 233 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 J3QRE1 110 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 EBAG9O00559 213 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 SLC16A6O15403 523 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 ENTPD6O75354 484 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 NDUFA7O95182 113 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 KNG1P01042 644 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 CRYBA1P05813 215 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 CAPZA1P52907 286 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 CNN3Q15417 329 aaKnown RBP12.9□□□□□ -0.34
HDAC4-213ENST00000496347 ODF4Q2M2E3 257 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 FIP1L1Q6UN15 594 aaKnown RBP12.9□□□□□ -0.34
HDAC4-213ENST00000496347 KCTD20Q7Z5Y7 419 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 PDZD9Q8IXQ8 264 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 PRSS35Q8N3Z0 413 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 OR5D13Q8NGL4 314 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 PP6455Q8WZ26 134 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 TNFRSF14Q92956 283 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 MRPL48Q96GC5 212 aaKnown RBP12.9□□□□□ -0.34
HDAC4-213ENST00000496347 MYCBPQ99417 103 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-213ENST00000496347 DPAGT1Q9H3H5 408 aa12.9□□□□□ -0.34
HDAC4-213ENST00000496347 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-213ENST00000496347 A6NIN4 97 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 NPFFO15130 113 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 MPZL2O60487 215 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 SERPINA3P01011 423 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms