RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PLK3Q9H4B4 646 aa7.48□□□□□ -1.21
EPHA4-213ENST00000495693 ZDHHC11Q9H8X9 412 aa7.48□□□□□ -1.21
EPHA4-213ENST00000495693 B3GNT2Q9NY97 397 aa7.48□□□□□ -1.21
EPHA4-213ENST00000495693 ZNF224Q9NZL3 707 aa7.48□□□□□ -1.21
EPHA4-213ENST00000495693 IL17BQ9UHF5 180 aa7.48□□□□□ -1.21
EPHA4-213ENST00000495693 KLK13Q9UKR3 277 aa7.48□□□□□ -1.21
EPHA4-213ENST00000495693 A0A0B4J2A0 478 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 IGKV1-9A0A0C4DH69 117 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 hCG_38984A0A1B0GV85 526 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 PMS2P1A4D2B8 440 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SLC22A20A6NK97 555 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 CEACAM18A8MTB9 384 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SLC22A5O76082 557 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 HLA-AP01891 365 aaKnown RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 PTHLHP12272 177 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 CEACAM1P13688 526 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 GNB3P16520 340 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 HLA-GP17693 338 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 AMY2BP19961 511 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TUBG1P23258 451 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 FPR2P25090 351 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 CD34P28906 385 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 APLNRP35414 380 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TNFSF10P50591 281 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TSPAN5P62079 268 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SRYQ05066 204 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 PLA2G7Q13093 441 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 UBE2V2Q15819 145 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 KIF26BQ2KJY2 2108 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 EIF2S3LQ2VIR3 472 aaKnown RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 PABPC1L2AQ5JQF8 200 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TMEM255AQ5JRV8 349 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 C1QTNF12Q5T7M4 302 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TSPO2Q5TGU0 170 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 OR2A2Q6IF42 318 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 IGFL2Q6UWQ7 119 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 ASCL4Q6XD76 172 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 COLCA1Q6ZS62 124 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 MRPL21Q7Z2W9 205 aaKnown RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 NUFIP2Q7Z417 695 aaKnown RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 LYG2Q86SG7 212 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SLC25A42Q86VD7 318 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 HOGA1Q86XE5 327 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 C1orf174Q8IYL3 243 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 DEFB124Q8NES8 71 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 BEST4Q8NFU0 473 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 LILRB4Q8NHJ6 448 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TERB2Q8NHR7 220 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SARAFQ96BY9 339 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 ZNF845Q96IR2 970 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 C1orf147Q96MC9 270 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 HIST1H2AAQ96QV6 131 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 VRK1Q99986 396 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SEC22CQ9BRL7 303 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 WNT5BQ9H1J7 359 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SLC6A15Q9H2J7 730 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 ELL3Q9HB65 397 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-213ENST00000495693 TUBG2Q9NRH3 451 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 PLEKHJ1Q9NW61 149 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 ZNF319Q9P2F9 582 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SHPKQ9UHJ6 478 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 FLVCR2Q9UPI3 526 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 MAB21L2Q9Y586 359 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 SDK2Q58EX2 2172 aa7.47□□□□□ -1.21
EPHA4-213ENST00000495693 MEIS3P1A6NDR6 274 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 L7N2F9 121 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 MASP2O00187 686 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 RRP8O43159 456 aaKnown RBP7.46□□□□□ -1.22
EPHA4-213ENST00000495693 CST4P01036 141 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 IGHG3P01860 377 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 ZNF735P0CB33 412 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 PET100P0DJ07 73 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 CXCL3P19876 107 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 SERPINA2P20848 420 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 NFYAP23511 347 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-213ENST00000495693 BLVRBP30043 206 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-213ENST00000495693 HRH1P35367 487 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 ZP1P60852 638 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 ARF1P84077 181 aaKnown RBP7.46□□□□□ -1.22
EPHA4-213ENST00000495693 FAM3AP98173 230 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 TBC1D28Q2M2D7 210 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 RSPO1Q2MKA7 263 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-213ENST00000495693 SNAI3Q3KNW1 292 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 MOGAT2Q3SYC2 334 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 CHRFAM7AQ494W8 412 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 TMEM128Q5BJH2 165 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 FBXW9Q5XUX1 488 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 PLCXD3Q63HM9 321 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 OR10K2Q6IF99 312 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 FAAP20Q6NZ36 180 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 TMED4Q7Z7H5 227 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 BIVMQ86UB2 503 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 SKA3Q8IX90 412 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 TUSC5Q8IXB3 177 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 MKXQ8IYA7 352 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-213ENST00000495693 OR5M8Q8NGP6 311 aa7.46□□□□□ -1.22
EPHA4-213ENST00000495693 COQ8AQ8NI60 647 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms