RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FAM122BQ7Z309 247 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 MDP1Q86V88 176 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 LRP11Q86VZ4 500 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 C8orf59Q8N0T1 100 aaPredicted RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 SLC37A3Q8NCC5 494 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 NPEPL1Q8NDH3 523 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 SDR9C7Q8NEX9 313 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 RHOXF1Q8NHV9 184 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 FAM81AQ8TBF8 368 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 YIPF5Q969M3 257 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 MRPL24Q96A35 216 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 CNBD2Q96M20 576 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 ZNF75AQ96N20 296 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 RBP7Q96R05 134 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 NMNAT3Q96T66 252 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 APOL4Q9BPW4 351 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 SRSF8Q9BRL6 282 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 OR51V1Q9H2C8 321 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 FN3KQ9H479 309 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 B3GNT2Q9NY97 397 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 MYEF2Q9P2K5 600 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 FBXL17Q9UF56 701 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 KLHL21Q9UJP4 597 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 GRIP1Q9Y3R0 1128 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 CMAHPQ9Y471 501 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 MGAM2Q2M2H8 2515 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 LOC105371242A0A075B767 164 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 PRSS37A4D1T9 235 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 A6NIZ1 184 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 M0R3G1 203 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OGG1O15527 345 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 PPIHO43447 177 aaKnown RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 PLPP2O43688 288 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 SYNGR3O43761 229 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 SLC16A7O60669 478 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 TXNDC12O95881 172 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 IGHMP01871 453 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 HLA-HP01893 362 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 GYPBP06028 91 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 QDPRP09417 244 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 CLUP10909 449 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 CD79AP11912 226 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ZNF35P13682 527 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 GABRB1P18505 474 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ACHEP22303 614 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 FMO3P31513 532 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 PYCR1P32322 319 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 CAPZA2P47755 286 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 EVX1P49640 407 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 TMEM33P57088 247 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 RAP1BP61224 184 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 RAP1AP62834 184 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 CD47Q08722 323 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 IL18R1Q13478 541 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 MED21Q13503 144 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 KRR1Q13601 381 aaKnown RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 CRMP1Q14194 572 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 MAD2L1BPQ15013 274 aaPredicted RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 ZNF718Q3SXZ3 478 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 KLHL12Q53G59 568 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 MESTQ5EB52 335 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 FAM76BQ5HYJ3 339 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 PLBD1Q6P4A8 553 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 USP43Q70EL4 1123 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ENTHD1Q8IYW4 607 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 GPR137CQ8N3F9 429 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 BBS1Q8NFJ9 593 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR51L1Q8NGJ5 315 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR8J1Q8NGP2 316 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR9Q1Q8NGQ5 310 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR6N1Q8NGY5 312 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR51F2Q8NH61 342 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR6X1Q8NH79 312 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ZNF519Q8TB69 540 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 CNIH3Q8TBE1 160 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ZNRF4Q8WWF5 429 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 TRUB1Q8WWH5 349 aaKnown RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 NSMAFQ92636 917 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 RDH5Q92781 318 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 SLC25A44Q96H78 314 aaPredicted RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 TSSK2Q96PF2 358 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 OR2M2Q96R28 347 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 GPX7Q96SL4 187 aaPredicted RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 DDOQ99489 341 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 PITX2Q99697 317 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 Q9H521 79 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 AMBNQ9NP70 447 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 RPRD1BQ9NQG5 326 aaKnown RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 CMC2Q9NRP2 79 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ZNF275Q9NSD4 429 aaPredicted RBP5.37□□□□□ -1.55
VIM-207ENST00000495528 CLN6Q9NWW5 311 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 UBAP1Q9NZ09 502 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 FZR1Q9UM11 496 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 B9D1Q9UPM9 204 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 TENM1Q9UKZ4 2725 aa5.37□□□□□ -1.55
VIM-207ENST00000495528 ZNF99A8MXY4 864 aaPredicted RBP5.36□□□□□ -1.55
VIM-207ENST00000495528 FAM90A26D6RGX4 464 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 M0R233 179 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 MPZL2O60487 215 aa5.36□□□□□ -1.55
VIM-207ENST00000495528 ENTPD6O75354 484 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms