RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	CLDN15	P56746	228 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	CEACAM16	Q2WEN9	425 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	CCDC157	Q569K6	752 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	PLXDC2	Q6UX71	529 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	C6orf201	Q7Z4U5	140 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	BVES	Q8NE79	360 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	PSMF1	Q92530	271 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	DDA1	Q9BW61	102 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	GPR35	Q9HC97	309 aa		13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	ZNF701	Q9NV72	531 aa	Predicted RBP	13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	BOK	Q9UMX3	212 aa	Predicted RBP	13.37	□□□□□ -0.27
CALD1-222	ENST00000495522	FAM230A	A0A1W2PPH8	454 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	PINLYP	A6NC86	204 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	JMJD7	P0C870	316 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	PATE4	P0C8F1	98 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	MPL	P40238	635 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	GFRA1	P56159	465 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	SUPT4H1	P63272	117 aa	Known RBP	13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	PSG4	Q00888	419 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	RSU1	Q15404	277 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	SURF2	Q15527	256 aa	Predicted RBP	13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	PDSS1	Q5T2R2	415 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	EIF4E3	Q8N5X7	224 aa	Known RBP	13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	EMG1	Q92979	244 aa	Known RBP	13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	ZNF75A	Q96N20	296 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	OR2H1	Q9GZK4	316 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	MCTS1	Q9ULC4	181 aa	Known RBP	13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	CSAG2	Q9Y5P2	127 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	MYO7B	Q6PIF6	2116 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	NCOR1	O75376	2440 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	PCSK5	Q92824	1860 aa		13.36	□□□□□ -0.27
CALD1-222	ENST00000495522	TRBV6-7	A0A0A0MS04	114 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	FIGNL2	A6NMB9	653 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	CSTB	P04080	98 aa	Known RBP	13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	FOXO1	Q12778	655 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	NKAPL	Q5M9Q1	402 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	LHFPL2	Q6ZUX7	228 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	TMEM105	Q8N8V8	129 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	THOC3	Q96J01	351 aa	Known RBP	13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	WNT5B	Q9H1J7	359 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	RGCC	Q9H4X1	137 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	LRFN1	Q9P244	771 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	RTTN	Q86VV8	2226 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	BDP1	A6H8Y1	2624 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522		F5H0A9	414 aa	Predicted RBP	13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	LINC01387	J3KSC0	135 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	RRP8	O43159	456 aa	Known RBP	13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	F10	P00742	488 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	GLRA1	P23415	457 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	ECI1	P42126	302 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	RBP2	P50120	134 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	FAM74A1	Q5RGS3	127 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	MOB3C	Q70IA8	216 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	DCUN1D4	Q92564	292 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	BORCS8	Q96FH0	119 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	ZNF845	Q96IR2	970 aa	Predicted RBP	13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	SPRY4	Q9C004	299 aa		13.35	□□□□□ -0.27
CALD1-222	ENST00000495522	IGKV1-27	A0A075B6S5	117 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	PCP4L1	A6NKN8	68 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	TEX46	H3BTG2	121 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	SPRY1	O43609	319 aa	Predicted RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ANGPTL7	O43827	346 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	NRAS	P01111	189 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ANKRD55	Q3KP44	614 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	TMEM42	Q69YG0	159 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ZNF100	Q8IYN0	542 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ABHD3	Q8WU67	409 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	TMEM45B	Q96B21	275 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ARRDC1-AS1	Q9H2J1	176 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	HSF4	Q9ULV5	492 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	C14orf166	Q9Y224	244 aa	Known RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	C9orf172	C9J069	976 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ADAP1	O75689	374 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	PGAM2	P15259	253 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	RPS2	P15880	293 aa	Known RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	TUSC1	Q2TAM9	212 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	SPINK14	Q6IE38	97 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	RPUSD3	Q6P087	351 aa	Known RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ASCL4	Q6XD76	172 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	SKA3	Q8IX90	412 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	FGFBP3	Q8TAT2	258 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	FAM173A	Q9BQD7	235 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	DNTTIP1	Q9H147	329 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	EDAR	Q9UNE0	448 aa		13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.34	□□□□□ -0.27
CALD1-222	ENST00000495522	CNTRL	Q7Z7A1	2325 aa		13.33	□□□□□ -0.27
CALD1-222	ENST00000495522	IGKV1D-8	A0A087WSZ0	117 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	hCG_38984	A0A1B0GV85	526 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	LGALS8	O00214	317 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	FARS2	O95363	451 aa	Known RBP	13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	PLAT	P00750	562 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	SNTB1	Q13884	538 aa	Known RBP	13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	RNF126	Q9BV68	326 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	PRR13	Q9NZ81	148 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	GPR160	Q9UJ42	338 aa		13.33	□□□□□ -0.28
CALD1-222	ENST00000495522	PRSS12	P56730	875 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms