RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 NAT1P18440 290 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 ACKR3P25106 362 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 VEGFCP49767 419 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 GUCA2AQ02747 115 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 KCNJ8Q15842 424 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 MOGAT2Q3SYC2 334 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 FAM214BQ7L5A3 538 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 ZSCAN4Q8NAM6 433 aaPredicted RBP14.05□□□□□ -0.16
CBX4-204ENST00000495122 CHST4Q8NCG5 386 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 CPEB3Q8NE35 698 aaKnown RBP14.05□□□□□ -0.16
CBX4-204ENST00000495122 C1orf162Q8NEQ5 155 aaPredicted RBP14.05□□□□□ -0.16
CBX4-204ENST00000495122 PXT1Q8NFP0 134 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 ASB13Q8WXK3 278 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 BORCS8Q96FH0 119 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 ZNF486Q96H40 463 aaPredicted RBP14.05□□□□□ -0.16
CBX4-204ENST00000495122 METTL9Q9H1A3 318 aa14.05□□□□□ -0.16
CBX4-204ENST00000495122 RANGRFQ9HD47 186 aaPredicted RBP14.05□□□□□ -0.16
CBX4-204ENST00000495122 TMEM235A6NFC5 223 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 SERPINE3A8MV23 424 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 ARPC1BO15143 372 aaKnown RBP14.04□□□□□ -0.16
CBX4-204ENST00000495122 IGHV3-9P01782 118 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 CD3DP04234 171 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 PATE4P0C8F1 98 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 SULT1A3P0DMM9 295 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 SULT1A4P0DMN0 295 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 APLNRP35414 380 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 GNG2P59768 71 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 ZP1P60852 638 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 RAB1AP62820 205 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 CD83Q01151 205 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 TMEM255AQ5JRV8 349 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 CRIP3Q6Q6R5 217 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 TRAPPC6BQ86SZ2 158 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 SPICQ8N5J4 248 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 OR5L1Q8NGL2 311 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 OR6K3Q8NGY3 331 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 OR2AE1Q8NHA4 323 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 POM121L2Q96KW2 1035 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 OCSTAMPQ9BR26 566 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 REPIN1Q9BWE0 567 aaKnown RBP14.04□□□□□ -0.16
CBX4-204ENST00000495122 TP63Q9H3D4 680 aaPredicted RBP14.04□□□□□ -0.16
CBX4-204ENST00000495122 IFT46Q9NQC8 304 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 POLQO75417 2590 aa14.04□□□□□ -0.16
CBX4-204ENST00000495122 UBE2QL1A1L167 161 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 FOXI3A8MTJ6 420 aaPredicted RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 MFNGO00587 321 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 TPD52L2O43399 206 aaKnown RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 CREBL2O60519 120 aaPredicted RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 IL18BPO95998 194 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 CST4P01036 141 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 CRHP06850 196 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 CD79AP11912 226 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 MGMTP16455 207 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 MTCP1P56278 107 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 ZNF92Q03936 586 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 TNK1Q13470 666 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 GK2Q14410 553 aaPredicted RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 RNASE10Q5GAN6 216 aaKnown RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 C1QTNF12Q5T7M4 302 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 PLXDC2Q6UX71 529 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 TFAP2EQ6VUC0 442 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 SAXO1Q8IYX7 474 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 ZNF295-AS1Q8N0V1 137 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 TMEM104Q8NE00 496 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 RNF170Q96K19 258 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 HYLS1Q96M11 299 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 SPACA5Q96QH8 159 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 GAL3ST1Q99999 423 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 GINS4Q9BRT9 223 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 SELENOIQ9C0D9 397 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 OR10A4Q9H209 315 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 RANBP3Q9H6Z4 567 aaPredicted RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 GPR173Q9NS66 373 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 ING4Q9UNL4 249 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 NPTNQ9Y639 398 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 MED13LQ71F56 2210 aa14.03□□□□□ -0.16
CBX4-204ENST00000495122 TEP1Q99973 2627 aaKnown RBP14.03□□□□□ -0.16
CBX4-204ENST00000495122 LOC100509620A0A075B734 347 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 MEIKINA0A087WXM9 373 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 FAM172BPA6NC97 362 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 H3BUI4 141 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 SSNA1O43805 119 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 HLA-HP01893 362 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 PMELP40967 661 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 GZMKP49863 264 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 MRPS15P82914 257 aaKnown RBP14.02□□□□□ -0.17
CBX4-204ENST00000495122 FCN2Q15485 313 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 SLC22A6Q4U2R8 563 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 ZNF626Q68DY1 528 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 Q6ZT83 130 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 MRPL21Q7Z2W9 205 aaKnown RBP14.02□□□□□ -0.17
CBX4-204ENST00000495122 PIAS4Q8N2W9 510 aaPredicted RBP14.02□□□□□ -0.17
CBX4-204ENST00000495122 RPRMLQ8N4K4 120 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 OR51S1Q8NGJ8 323 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 OR51T1Q8NGJ9 327 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 LURAP1Q96LR2 239 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 NKX3-1Q99801 234 aaPredicted RBP14.02□□□□□ -0.17
CBX4-204ENST00000495122 NKIRAS2Q9NYR9 191 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 COQ3Q9NZJ6 369 aa14.02□□□□□ -0.17
CBX4-204ENST00000495122 PRSS50Q9UI38 385 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms