RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SERPINA2P20848 420 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 BMP5P22003 454 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TLX1P31314 330 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CLDN6P56747 220 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 YPEL3P61236 119 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 OR5I1Q13606 314 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 ARL6IP1Q15041 203 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 RNPS1Q15287 305 aaKnown RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TCTN1Q2MV58 587 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TRIM61Q5EBN2 209 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 HMGN2P46Q86SG4 172 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 CACUL1Q86Y37 369 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 LYG1Q8N1E2 194 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 PNKDQ8N490 385 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SLC22A24Q8N4F4 322 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 GVQW1Q8N7I0 195 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 OR5B3Q8NH48 314 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TSEN15Q8WW01 171 aaKnown RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 GPR146Q96CH1 333 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 RASD2Q96D21 266 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 JSRP1Q96MG2 331 aaPredicted RBP4.22□□□□□ -1.73
PRKD3-210ENST00000494667 GAL3ST4Q96RP7 486 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TP53RKQ96S44 253 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 SH3BGRL3Q9H299 93 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 TAS2R4Q9NYW5 299 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 R4GMQ9 66 aa4.22□□□□□ -1.73
PRKD3-210ENST00000494667 NPIPA2E9PIF3 369 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SMIM10L1P0DMW3 83 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 VSIG8P0DPA2 414 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 BCL2P10415 239 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 CCKBRP32239 447 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 FHITP49789 147 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 CNN1P51911 297 aaKnown RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SEC13P55735 322 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 RAB38P57729 211 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM187Q14656 261 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 P2RY6Q15077 328 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 HYAL4Q2M3T9 481 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 C1orf140Q5VVS0 124 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 LHX8Q68G74 356 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF440Q8IYI8 595 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ZCCHC10Q8TBK6 192 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ADAMTS18Q8TE60 1221 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 WBP2Q969T9 261 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SMIM10Q96HG1 83 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 RASL10BQ96S79 203 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 TTTY10Q9BZA0 68 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 LPAR5Q9H1C0 372 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 G6PC2Q9NQR9 355 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SMPXQ9UHP9 88 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 RNF150Q9ULK6 438 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 HHLA2Q9UM44 414 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF780BQ9Y6R6 833 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 IGKV1D-42A0A075B6H8 117 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 IGKV1-8A0A0C4DH67 115 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 DUXBA0A1W2PPF3 345 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM250H0YL14 139 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 MSTNO14793 375 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 RAMP3O60896 148 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 CEACAM8P31997 349 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 OTX1P32242 354 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SFTPDP35247 375 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 RPL29P47914 159 aaKnown RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 UCP3P55916 312 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 CLDN18P56856 261 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 S100A10P60903 97 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SMAD4Q13485 552 aaKnown RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 GPR18Q14330 331 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SLC9A3R2Q15599 337 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM95Q3KNT9 176 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 CTXN3Q4LDR2 81 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 VWA1Q6PCB0 445 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ASCL4Q6XD76 172 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 Q8N976 141 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SLC38A9Q8NBW4 561 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 OR13C9Q8NGT0 318 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 OR2I1PQ8NGU4 316 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 FAM213BQ8TBF2 198 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 LRRC3BQ96PB8 259 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 NKX3-1Q99801 234 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF319Q9P2F9 582 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 LIPGQ9Y5X9 500 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SCDO00767 359 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 CDS2O95674 445 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 TIMP1P01033 207 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 C8AP07357 584 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 THEGLP0DJG4 465 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 HOXB2P14652 356 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 RBMXP38159 391 aaKnown RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 EFNA3P52797 238 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 PRKAG1P54619 331 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 PRDX1Q06830 199 aaKnown RBP4.21□□□□□ -1.74
PRKD3-210ENST00000494667 SLC8B1Q6J4K2 584 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 PLPP7Q8NBV4 271 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 OR6K6Q8NGW6 343 aa4.21□□□□□ -1.74
PRKD3-210ENST00000494667 KXD1Q9BQD3 176 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms