RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PPIAL4GP0DN37 164 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 IGHV4-38-2P0DP08 117 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 SLC2A5P22732 501 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 NPY4RP50391 375 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 FGF12P61328 243 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 UBA52P62987 128 aaKnown RBP6.69□□□□□ -1.34
RIF1-211ENST00000494333 BAMBIQ13145 260 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 SNCBQ16143 134 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 FAHD1Q6P587 224 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 KCTD18Q6PI47 426 aaPredicted RBP6.69□□□□□ -1.34
RIF1-211ENST00000494333 KCTD20Q7Z5Y7 419 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 WDR86Q86TI4 376 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 PARP8Q8N3A8 854 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 FTMTQ8N4E7 242 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 CSNK2A3Q8NEV1 391 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 OR1M1Q8NGA1 313 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 DNAJC9Q8WXX5 260 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 PIGCQ92535 297 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 UPRTQ96BW1 309 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 ZNF48Q96MX3 618 aaPredicted RBP6.69□□□□□ -1.34
RIF1-211ENST00000494333 DUX5Q96PT3 197 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 PAPOLGQ9BWT3 736 aaKnown RBP6.69□□□□□ -1.34
RIF1-211ENST00000494333 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 RGCCQ9H4X1 137 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 NIPAL2Q9H841 368 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 RNPEPL1Q9HAU8 725 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 TRIM36Q9NQ86 728 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 KLHDC2Q9Y2U9 406 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 AP4S1Q9Y587 144 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 SOX21Q9Y651 276 aaPredicted RBP6.69□□□□□ -1.34
RIF1-211ENST00000494333 TANC2Q9HCD6 1990 aa6.69□□□□□ -1.34
RIF1-211ENST00000494333 WNK2Q9Y3S1 2297 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 TRAV40A0A0B4J280 105 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 TMEM269A0A1B0GVZ9 245 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 ANXA2P2A6NMY6 339 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 ZNF850A8MQ14 1090 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 ENSAO43768 121 aaKnown RBP6.68□□□□□ -1.34
RIF1-211ENST00000494333 PRKYO43930 277 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 MITFO75030 526 aaPredicted RBP6.68□□□□□ -1.34
RIF1-211ENST00000494333 ATP5HO75947 161 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 LIPFP07098 398 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 EGR1P18146 543 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 PRTN3P24158 256 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 ACKR3P25106 362 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 FASP25445 335 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 EPHA2P29317 976 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 MTNR1AP48039 350 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 COMPP49747 757 aaPredicted RBP6.68□□□□□ -1.34
RIF1-211ENST00000494333 ESRRGP62508 458 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 CSNK2BP67870 215 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 IL5RAQ01344 420 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 PRDX4Q13162 271 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 ATP6AP1Q15904 470 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 MICBQ29980 383 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 C1orf146Q5VVC0 180 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 TEX36Q5VZQ5 186 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 WDR82Q6UXN9 313 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 BCDIN3DQ7Z5W3 292 aaKnown RBP6.68□□□□□ -1.34
RIF1-211ENST00000494333 AMIGO2Q86SJ2 522 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 GALNT4Q8N4A0 578 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 C3orf56Q8N813 242 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 OR8B12Q8NGG6 310 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 LRRC29Q8WV35 223 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 SEH1LQ96EE3 360 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 RNF170Q96K19 258 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 LYZL4Q96KX0 146 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 HIST1H2AAQ96QV6 131 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 CCL13Q99616 98 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 MICU1Q9BPX6 476 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 PCGF1Q9BSM1 259 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 MROQ9BYG7 248 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 YIPF3Q9GZM5 350 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 KRT84Q9NSB2 600 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 LRP12Q9Y561 859 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 MPC1Q9Y5U8 109 aa6.68□□□□□ -1.34
RIF1-211ENST00000494333 CCDC182A6NF36 153 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 DNAJC9-AS1A6NH13 148 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 LINC00473A8K010 186 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 ZNF879B4DU55 563 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 M0R129 80 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 RAB27BO00194 218 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 DVL1O14640 695 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 CST4P01036 141 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 SFTPBP07988 381 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 MUC1P15941 1255 aaPredicted RBP6.67□□□□□ -1.34
RIF1-211ENST00000494333 BTF3P20290 206 aaKnown RBP6.67□□□□□ -1.34
RIF1-211ENST00000494333 GMFBP60983 142 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 ARF6P62330 175 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 ELF3P78545 371 aaPredicted RBP6.67□□□□□ -1.34
RIF1-211ENST00000494333 DMRTC1Q5HYR2 192 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 GPR157Q5UAW9 335 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 LCN1P1Q5VSP4 162 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 KDM4DQ6B0I6 523 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 DEGS2Q6QHC5 323 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 BRD3OSQ6XYD6 125 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 KCTD8Q6ZWB6 473 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 BTN2A1Q7KYR7 527 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 MEPCEQ7L2J0 689 aaKnown RBP6.67□□□□□ -1.34
RIF1-211ENST00000494333 ZNF679Q8IYX0 411 aa6.67□□□□□ -1.34
RIF1-211ENST00000494333 TCEANCQ8N8B7 351 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms