RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SLC25A26Q70HW3 274 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 KRTAP1-3Q8IUG1 177 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 NKAIN3Q8N8D7 197 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 PNLDC1Q8NA58 520 aaKnown RBP12.26□□□□□ -0.45
BRCA1-223ENST00000494123 WFDC11Q8NEX6 87 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 OR5D18Q8NGL1 313 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 BPESC1Q9GZL8 116 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 OR51E2Q9H255 320 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 PPIL3Q9H2H8 161 aaKnown RBP12.26□□□□□ -0.45
BRCA1-223ENST00000494123 METTL17Q9H7H0 456 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-223ENST00000494123 WIPI2Q9Y4P8 454 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
BRCA1-223ENST00000494123 PPIAL4EA0A075B759 164 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 MEGF11A6BM72 1044 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 PPIAL4DF5H284 164 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 AKR7A2O43488 359 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 SYNGR1O43759 233 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 ZNF205O95201 554 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 PPIAL4FP0DN26 164 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 MPZP25189 248 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 BTG1P62324 171 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 IL24Q13007 206 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 GPR141Q7Z602 305 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 MKXQ8IYA7 352 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 JAGN1Q8N5M9 183 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 GCSAMQ8N6F7 178 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 OR13F1Q8NGS4 319 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 YIPF6Q96EC8 236 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 FAM192AQ9GZU8 254 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 SNTG1Q9NSN8 517 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 TXNL4BQ9NX01 149 aaKnown RBP12.25□□□□□ -0.45
BRCA1-223ENST00000494123 PPIAL4AQ9Y536 164 aa12.25□□□□□ -0.45
BRCA1-223ENST00000494123 SRRM5B3KS81 715 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-223ENST00000494123 TFAP2AP05549 437 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 TMEM225BP0DP42 221 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 GLRA1P23415 457 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 FGF9P31371 208 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-223ENST00000494123 CD80P33681 288 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 CFHR2P36980 270 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 NR4A2P43354 598 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 PDZK1IP1Q13113 114 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 OR51F2Q8NH61 342 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 TNFAIP8L1Q8WVP5 186 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 SLAMF9Q96A28 289 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 TMIGD2Q96BF3 282 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 S100A13Q99584 98 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 DNAJB11Q9UBS4 358 aa12.24□□□□□ -0.45
BRCA1-223ENST00000494123 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 VWC2LB2RUY7 222 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 C3orf80F5H4A9 247 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 TRAPPC2LH3BP13 241 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 AIREO43918 545 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 LHBP01229 141 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 EGR1P18146 543 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 MDH2P40926 338 aaKnown RBP12.23□□□□□ -0.45
BRCA1-223ENST00000494123 ALDH3B2P48448 385 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 ZMYND11Q15326 602 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 GLT8D1Q68CQ7 371 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 SFRP4Q6FHJ7 346 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-223ENST00000494123 GDPGP1Q6ZNW5 385 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 RNF144BQ7Z419 303 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 LRRTM1Q86UE6 522 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 CDH26Q8IXH8 852 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 MUC20Q8N307 709 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-223ENST00000494123 POC1AQ8NBT0 407 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 C19orf18Q8NEA5 215 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 ZNF488Q96MN9 340 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 NKX3-1Q99801 234 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-223ENST00000494123 FUNDC2Q9BWH2 189 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 NARFLQ9H6Q4 476 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
BRCA1-223ENST00000494123 TRAV1-2A0A0B4J238 106 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 OOEPA6NGQ2 149 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 LGALS8O00214 317 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 PDCD5O14737 125 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ANGPTL7O43827 346 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 NXPH2O95156 264 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 IGHV2-70P01814 119 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 PGA5P0DJD9 388 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 OR3A4PP47883 348 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 HOXA4Q00056 320 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 KCNJ8Q15842 424 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 MICBQ29980 383 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 BATF2Q8N1L9 274 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 FOXRED1Q96CU9 486 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 KCTD7Q96MP8 289 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 GAL3ST1Q99999 423 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ELL3Q9HB65 397 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 MAP1AP78559 2803 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 TEX15Q9BXT5 2789 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 IGHV3OR15-7A0A075B7D8 119 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 TRAV38-1A0A0B4J264 116 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 WNT9BO14905 357 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms