RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 OR5D13Q8NGL4 314 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 CTDSP1Q9GZU7 261 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 FGF7P21781 194 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PTGFRP43088 359 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 KIR2DS2P43631 304 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 HFEQ30201 348 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PDZD11Q5EBL8 140 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 ZNRF4Q8WWF5 429 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 NEIL1Q96FI4 390 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-207ENST00000494090 CTDSPLO15194 276 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 ABHD1Q96SE0 405 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF275Q9NSD4 429 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-207ENST00000494090 DBX1A6NMT0 343 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 M0R1X1 148 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PLPP3O14495 311 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 GSTZ1O43708 216 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-207ENST00000494090 NGFP01138 241 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PGA3P0DJD8 388 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 GABRA1P14867 456 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PRDX4Q13162 271 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 MRM1Q6IN84 353 aaKnown RBP17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PRSS42Q7Z5A4 293 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 TGIF2Q9GZN2 237 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 GAL3ST2Q9H3Q3 398 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 YTHDF2Q9Y5A9 579 aaKnown RBP17.06■□□□□ 0.32
COL27A1-207ENST00000494090 OGG1O15527 345 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 PPP1R1AQ13522 171 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 STUMQ69YW2 141 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 RHBDD2Q6NTF9 364 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 DEFB124Q8NES8 71 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 NUBPLQ8TB37 319 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 GPR87Q9BY21 358 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 SNCGO76070 127 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 CRYBA1P05813 215 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 CNTRLQ7Z7A1 2325 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 NECAP1Q8NC96 275 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 LURAP1Q96LR2 239 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 TMED3Q9Y3Q3 217 aa17.06■□□□□ 0.32
COL27A1-207ENST00000494090 RER1O15258 196 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 SPP1P10451 314 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 SLC6A1P30531 599 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 TRIP6Q15654 476 aaKnown RBP17.05■□□□□ 0.32
COL27A1-207ENST00000494090 NTNG2Q96CW9 530 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 MAP6Q96JE9 813 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 AMMECR1Q9Y4X0 333 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-207ENST00000494090 LRRC3CA6NJW4 275 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 IGHA1P01876 353 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF816Q0VGE8 651 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-207ENST00000494090 OR5I1Q13606 314 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 MMP26Q9NRE1 261 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF586Q9NXT0 402 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 V9GYH0 126 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 SERTM2A0A1B0GWG4 89 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 C9orf170A2RU37 121 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 TXNDC12O95881 172 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 SLC25A4P12235 298 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 UBE3DQ7Z6J8 389 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 ADGRG7Q96K78 797 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 FKBP11Q9NYL4 201 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 A0A1B0GTH9 108 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 K7EQS6 105 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 SFTA3P0C7M3 94 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 C4orf17Q53FE4 359 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 NCR3LG1Q68D85 454 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 Q7L0L9 218 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 MCHR2Q969V1 340 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 RPEQ96AT9 228 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 GNRHR2Q96P88 292 aa17.05■□□□□ 0.32
COL27A1-207ENST00000494090 OR5B21A6NL26 309 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF83P51522 516 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 OR4D11Q8NGI4 311 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 CA5BP1Q8WTZ4 195 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
COL27A1-207ENST00000494090 AAMDCQ9H7C9 122 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 OR10D3Q8NH80 312 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 G3V3Q6 166 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-207ENST00000494090 SMIM17P0DL12 118 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 COL9A1P20849 921 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 FZD5Q13467 585 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 IRF3Q14653 427 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 AKR1E2Q96JD6 320 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 YBX2Q9Y2T7 364 aaKnown RBP17.04■□□□□ 0.32
COL27A1-207ENST00000494090 NHLRC2Q8NBF2 726 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 CMBLQ96DG6 245 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 MOGAT1Q96PD6 335 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 SMCHD1A6NHR9 2005 aa17.04■□□□□ 0.32
COL27A1-207ENST00000494090 CEACAM3P40198 252 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 MRM2Q9UI43 246 aaKnown RBP17.03■□□□□ 0.32
COL27A1-207ENST00000494090 HMSDA8MTL9 139 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 ONECUT1Q9UBC0 465 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 hADV38S2A0JD32 116 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 CDC14BO60729 498 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 RNF212Q495C1 297 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 TMEM92Q6UXU6 159 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 ST6GAL2Q96JF0 529 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 KLF3P57682 345 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-207ENST00000494090 PABPC1L2AQ5JQF8 200 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 OR2T2Q6IF00 324 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 CBLN3Q6UW01 205 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms