RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 VGLL3A8MV65 326 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 B2RBV5 119 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 SLC1A7O00341 560 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 SYNGR1O43759 233 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 FBXO24O75426 580 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 DCTN3O75935 186 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 ALX3O95076 343 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 IGLV3-1P01715 115 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 RAP2AP10114 183 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 CD28P10747 220 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 FAHP16930 419 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 SLC2A5P22732 501 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 CEBPDP49716 269 aaPredicted RBP14.06□□□□□ -0.16
COL9A1-210ENST00000493682 RPS7P62081 194 aaKnown RBP14.06□□□□□ -0.16
COL9A1-210ENST00000493682 CDK5Q00535 292 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 OXLD1Q5BKU9 147 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 DEGS2Q6QHC5 323 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 LHFPL4Q7Z7J7 247 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 TMEM179BQ7Z7N9 219 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 ARHGAP24Q8N264 748 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 OR2T27Q8NH04 317 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 TEAD3Q99594 435 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 CHID1Q9BWS9 393 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 YIPF3Q9GZM5 350 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 PBOV1Q9GZY1 135 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 GPR84Q9NQS5 396 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 PIGLQ9Y2B2 252 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 GSC2O15499 205 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 CST1P01037 141 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 NRASP01111 189 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 PGA5P0DJD9 388 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 OSMP13725 252 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF273Q14593 569 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 ZBTB37Q5TC79 503 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 KCTD18Q6PI47 426 aaPredicted RBP14.05□□□□□ -0.16
COL9A1-210ENST00000493682 CCBE1Q6UXH8 406 aaPredicted RBP14.05□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF782Q6ZMW2 699 aaPredicted RBP14.05□□□□□ -0.16
COL9A1-210ENST00000493682 DYNAPQ8N1N2 210 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 Q8N2B8 174 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 C1orf21Q9H246 121 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 ENPP5Q9UJA9 477 aa14.05□□□□□ -0.16
COL9A1-210ENST00000493682 PRR32B1ATL7 298 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 J3QT63 122 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 XPNPEP2O43895 674 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 NOS1APO75052 506 aaPredicted RBP14.04□□□□□ -0.16
COL9A1-210ENST00000493682 HAAOP46952 286 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 RAB13P51153 203 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 EMX1Q04741 257 aaPredicted RBP14.04□□□□□ -0.16
COL9A1-210ENST00000493682 APOFQ13790 326 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 PLA1AQ53H76 456 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF684Q5T5D7 378 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 OR4S1Q8NGB4 309 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 MRAPQ8TCY5 172 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 NRIP2Q9BQI9 281 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 CDCA4Q9BXL8 241 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 MROQ9BYG7 248 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 MMP28Q9H239 520 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 NUFIP1Q9UHK0 495 aaKnown RBP14.04□□□□□ -0.16
COL9A1-210ENST00000493682 TCF19Q9Y242 345 aa14.04□□□□□ -0.16
COL9A1-210ENST00000493682 A6NDX4 124 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 DHRS3O75911 302 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 NXPH2O95156 264 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 TK1P04183 234 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 MRPL3P09001 348 aaKnown RBP14.03□□□□□ -0.16
COL9A1-210ENST00000493682 PIPP12273 146 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-210ENST00000493682 DLX6P56179 175 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 ROM1Q03395 351 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 MFGE8Q08431 387 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-210ENST00000493682 TMEM236Q5W0B7 351 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 TMEM219Q86XT9 240 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 NDUFA11Q86Y39 141 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF573Q86YE8 665 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 CALHM1Q8IU99 346 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 ADGRG5Q8IZF4 528 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 BATF2Q8N1L9 274 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 WIPF2Q8TF74 440 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-210ENST00000493682 R3HDM4Q96D70 268 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 LRGUKQ96M69 825 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 OR8B4Q96RC9 309 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF556Q9HAH1 456 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 NECAP2Q9NVZ3 263 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 POLDIP2Q9Y2S7 368 aa14.03□□□□□ -0.16
COL9A1-210ENST00000493682 PQLC2LA1A4F0 135 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 ADARB2-AS1A8MUL3 147 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 C17orf98A8MV24 154 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 GNGT2O14610 69 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF254O75437 659 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 TTRP02766 147 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 ARG1P05089 322 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 LOXL3P58215 753 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 CNN3Q15417 329 aaKnown RBP14.02□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF829Q3KNS6 432 aaPredicted RBP14.02□□□□□ -0.17
COL9A1-210ENST00000493682 LDLRAD2Q5SZI1 272 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 TMEM42Q69YG0 159 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF679Q8IYX0 411 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 HS3ST5Q8IZT8 346 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 RPS4Y2Q8TD47 263 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 SGCDQ92629 289 aa14.02□□□□□ -0.17
COL9A1-210ENST00000493682 FOXRED1Q96CU9 486 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms