RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 C19orf12Q9NSK7 152 aa11.98□□□□□ -0.49
ATG4B-223ENST00000493618 MRM2Q9UI43 246 aaKnown RBP11.98□□□□□ -0.49
ATG4B-223ENST00000493618 SLC22A13Q9Y226 551 aa11.98□□□□□ -0.49
ATG4B-223ENST00000493618 R4GMQ9 66 aa11.98□□□□□ -0.49
ATG4B-223ENST00000493618 A0A1B0GTI1 187 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 BTBD17A6NE02 478 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 SLC22A31A6NKX4 558 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 RFPL4AA6NLU0 287 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 RFPL4AL1F8VTS6 287 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 H0YAE9 185 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 M0R1W7 72 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 ANGPTL7O43827 346 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 MTRF1O75570 445 aaKnown RBP11.97□□□□□ -0.49
ATG4B-223ENST00000493618 HAAOP46952 286 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 EFNB1P98172 346 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 BNIP1Q12981 228 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 BLMHQ13867 455 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 CLVS2Q5SYC1 327 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 ZBTB37Q5TC79 503 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 KDM4DQ6B0I6 523 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 DHRS7BQ6IAN0 325 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-223ENST00000493618 HCP5Q6MZN7 132 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 OR4M1Q8NGD0 313 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 TRMT10AQ8TBZ6 339 aaKnown RBP11.97□□□□□ -0.49
ATG4B-223ENST00000493618 LRTOMTQ8WZ04 291 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 RORBQ92753 470 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 SDSLQ96GA7 329 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 DMRTB1Q96MA1 342 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
ATG4B-223ENST00000493618 CLN6Q9NWW5 311 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 OR14J1Q9UGF5 321 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 VPREB3Q9UKI3 123 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 V9GYS6 101 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 DSCAML1Q8TD84 2053 aa11.97□□□□□ -0.49
ATG4B-223ENST00000493618 J3QT63 122 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 FASP25445 335 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 POLR2IP36954 125 aaKnown RBP11.96□□□□□ -0.49
ATG4B-223ENST00000493618 UBE2E1P51965 193 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 ERVFRD-1P60508 538 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 RPL15P61313 204 aaKnown RBP11.96□□□□□ -0.49
ATG4B-223ENST00000493618 DEFA6Q01524 100 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 SMIM21Q3B7S5 101 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 NCR3LG1Q68D85 454 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 ANGPTL5Q86XS5 388 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 MKXQ8IYA7 352 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 ELMOD2Q8IZ81 293 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 YIPF7Q8N8F6 280 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 ZSCAN4Q8NAM6 433 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-223ENST00000493618 CIB1Q99828 191 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 GABARAPL1Q9H0R8 117 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 PPA2Q9H2U2 334 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 MOB1AQ9H8S9 216 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 RASL12Q9NYN1 266 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 AP4S1Q9Y587 144 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
ATG4B-223ENST00000493618 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.5
ATG4B-223ENST00000493618 TRBV23-1A0A0A0MS06 115 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 FAM230AA0A1W2PPH8 454 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 PQLC2LA1A4F0 135 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 H3BUX3 64 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 INMTO95050 263 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 NXPH2O95156 264 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 PGA5P0DJD9 388 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 PRDX2P32119 198 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 PROK1P58294 105 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 ACTR3P61158 418 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 EGR3Q06889 387 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 LY6EQ16553 131 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 C1orf146Q5VVC0 180 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 ASPHD2Q6ICH7 369 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 ZNF573Q86YE8 665 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 CALHM1Q8IU99 346 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 ZDHHC13Q8IUH4 622 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 GID4Q8IVV7 300 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 MNTQ99583 582 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 RIBC2Q9H4K1 309 aa11.95□□□□□ -0.5
ATG4B-223ENST00000493618 A0A1W2PQL4 384 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-223ENST00000493618 MEX3AA1L020 520 aaKnown RBP11.94□□□□□ -0.5
ATG4B-223ENST00000493618 ANKRD61A6NGH8 418 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 M0QZ24 198 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 SLC1A7O00341 560 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 DLGAP1O14490 977 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 CLPXO76031 633 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 KRT8P05787 483 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 CCL3L1P16619 93 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 COX7A1P24310 79 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 BMXP51813 675 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 RPL31P62899 125 aaKnown RBP11.94□□□□□ -0.5
ATG4B-223ENST00000493618 MIDNQ504T8 468 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 TMEM200BQ69YZ2 307 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 CATSPERDQ86XM0 798 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 ZNF561Q8N587 486 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 OR2T27Q8NH04 317 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 SSX3Q99909 188 aa11.94□□□□□ -0.5
ATG4B-223ENST00000493618 C16orf95Q9H693 158 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms