RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 CHST6Q9GZX3 395 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 OR10A4Q9H209 315 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 RHOFQ9HBH0 211 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 OBP2BQ9NPH6 170 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 HSF4Q9ULV5 492 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 ANAPC10Q9UM13 185 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 LAMA1P25391 3075 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 MUC6Q6W4X9 2439 aa8.69□□□□□ -1.02
PRPF3-206ENST00000493553 NCOA6Q14686 2063 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 DNAH14Q0VDD8 3507 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 GVINP1Q7Z2Y8 2422 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 IGKV1-9A0A0C4DH69 117 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 hCG_38984A0A1B0GV85 526 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 SMAD7O15105 426 aaKnown RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 RGS11O94810 467 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 AMY2AP04746 511 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 RLN1P04808 185 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 FCER2P06734 321 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 TPOP07202 933 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 TMEM225BP0DP42 221 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 MGMTP16455 207 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 OR3A4PP47883 348 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 RAB1AP62820 205 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 ARFRP1Q13795 201 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 FCN2Q15485 313 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 UBE2V2Q15819 145 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 DEFB109BQ30KR1 87 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 VAX1Q5SQQ9 334 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF626Q68DY1 528 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 RPUSD3Q6P087 351 aaKnown RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 C3P1Q6ZMU1 363 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 MRPL21Q7Z2W9 205 aaKnown RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 GLCCI1Q86VQ1 547 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 FJX1Q86VR8 437 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 BPIFB2Q8N4F0 458 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 OR51S1Q8NGJ8 323 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 AKR7LQ8NHP1 331 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 C1orf147Q96MC9 270 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 LRFN3Q9BTN0 628 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF436Q9C0F3 470 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 MRPL15Q9P015 296 aaKnown RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 EIF3KQ9UBQ5 218 aaKnown RBP8.68□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF222Q9UK12 451 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 NPTNQ9Y639 398 aa8.68□□□□□ -1.02
PRPF3-206ENST00000493553 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 CST4P01036 141 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 CD79AP11912 226 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 SELEP16581 610 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 BLVRBP30043 206 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 HOXC12P31275 282 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 OR3A3P47888 321 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 GMFBP60983 142 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 UBE2NP61088 152 aaKnown RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 FAM3AP98173 230 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 PLA2G7Q13093 441 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF169Q14929 603 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 SURF2Q15527 256 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 ST3GAL2Q16842 350 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 TBC1D28Q2M2D7 210 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 SNAI3Q3KNW1 292 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 LCE4AQ5TA78 99 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 ATP1A1-AS1Q5TC04 95 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 NSUN5P2Q63ZY6 315 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 OR10K2Q6IF99 312 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 LIN54Q6MZP7 749 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 INO80CQ6PI98 192 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 IDO2Q6ZQW0 420 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 BVESQ8NE79 360 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 OR1K1Q8NGR3 316 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF431Q8TF32 576 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 CAPSLQ8WWF8 208 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 BCL2L2Q92843 193 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 GCDHQ92947 438 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 PLK3Q9H4B4 646 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 ELL3Q9HB65 397 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-206ENST00000493553 CLCF1Q9UBD9 225 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 ZNF69Q9UC07 566 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 MPC1Q9Y5U8 109 aa8.67□□□□□ -1.02
PRPF3-206ENST00000493553 MED13Q9UHV7 2174 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 PHF3Q92576 2039 aaKnown RBP8.66□□□□□ -1.02
PRPF3-206ENST00000493553 KIAA1549Q9HCM3 1950 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 PCSK5Q92824 1860 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 C5orf49A4QMS7 147 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 OR5B21A6NL26 309 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 MFNGO00587 321 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 DTYMKP23919 212 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 CXADRP78310 365 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 P2RY6Q15077 328 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 GRK1Q15835 563 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 KRTCAP3Q53RY4 240 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 PLCXD3Q63HM9 321 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 Q6ZT83 130 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 BIVMQ86UB2 503 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 TMEM200AQ86VY9 491 aa8.66□□□□□ -1.02
PRPF3-206ENST00000493553 HOGA1Q86XE5 327 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms