RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 STARD9Q9P2P6 4700 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 LPLP06858 475 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 JUNBP17275 347 aaPredicted RBP11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 SPI1P17947 270 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 CHATP28329 748 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 MYCNOSP40205 109 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 CEBPDP49716 269 aaPredicted RBP11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 RPL23AP62750 156 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 DYNC1I2Q13409 638 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 DMRTC1Q5HYR2 192 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 OR5A2Q8NGI9 324 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 GNPDA2Q8TDQ7 276 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 CAPSLQ8WWF8 208 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 LYZL4Q96KX0 146 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 ATP6V1G3Q96LB4 118 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 OR8B4Q96RC9 309 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 P2RX4Q99571 388 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 EGLN3Q9H6Z9 239 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 BRD7Q9NPI1 651 aa11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 SAMD4AQ9UPU9 718 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-211ENST00000493468 CSMD3Q7Z407 3707 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 NDUFAB1O14561 156 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 SLC22A2O15244 555 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 NOS1APO75052 506 aaPredicted RBP11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 OR2F2O95006 317 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 GYPBP06028 91 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 CRMP1Q14194 572 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 ABCA11PQ4W5N1 156 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 LINC01590Q5TEZ4 76 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 C8orf82Q6P1X6 216 aaPredicted RBP11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 HAGHLQ6PII5 290 aaPredicted RBP11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 OR6K6Q8NGW6 343 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 HOPXQ9BPY8 73 aaPredicted RBP11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 TBC1D23Q9NUY8 699 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 DCAF13Q9NV06 445 aaKnown RBP11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 IL20Q9NYY1 176 aa11.32□□□□□ -0.6
PRPF40A-211ENST00000493468 K7N7A8 449 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 SEMG1P04279 462 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 AMY1AP04745 511 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 AMY2AP04746 511 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 H2BFMP0C1H6 154 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 PIPP12273 146 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 NCK1P16333 377 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 MAP2K3P46734 347 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 ACTA2P62736 377 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 ACTG2P63267 376 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 ACTC1P68032 377 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 ACTA1P68133 377 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 ZBTB49Q6ZSB9 765 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 SHFQ7M4L6 423 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 OR2W3Q7Z3T1 314 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 OR6N2Q8NGY6 317 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 NDNFQ8TB73 568 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 INTS14Q96SY0 518 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 AMELYQ99218 206 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 KCTD14Q9BQ13 255 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 HES4Q9HCC6 221 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 ZFP57Q9NU63 452 aa11.31□□□□□ -0.6
PRPF40A-211ENST00000493468 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 J3QT63 122 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 M0QZK8 103 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 CLUP10909 449 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 BRS3P32247 399 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 PSMA6P60900 246 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 MEF2CQ06413 473 aaPredicted RBP11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 CEP78Q5JTW2 689 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 LCN1P1Q5VSP4 162 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 ERI1Q8IV48 349 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 OR8B12Q8NGG6 310 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 OR8D4Q8NGM9 314 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 FAM81AQ8TBF8 368 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 ASCL2Q99929 193 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 NRIP2Q9BQI9 281 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 BAIAP2Q9UQB8 552 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 POLDIP2Q9Y2S7 368 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 SESN1Q9Y6P5 492 aa11.3□□□□□ -0.6
PRPF40A-211ENST00000493468 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 NXPH2O95156 264 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 LYL1P12980 280 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 ATP6V1B1P15313 513 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 HTR1DP28221 377 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 ARHGDIBP52566 201 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 PLBD1Q6P4A8 553 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 RP9Q8TA86 221 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 ZNF488Q96MN9 340 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 PRR25Q96S07 402 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 CLEC7AQ9BXN2 247 aa11.29□□□□□ -0.6
PRPF40A-211ENST00000493468 NIPAL2Q9H841 368 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms