RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 DUX4L3P0CJ86 424 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DUX4L5P0CJ88 424 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DUX4L6P0CJ89 424 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DUX4L7P0CJ90 424 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ADORA3P0DMS8 318 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 UMPSP11172 480 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 IFI30P13284 250 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF32P17041 273 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ATP6V1B2P21281 511 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CCNOP22674 350 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 AHCYP23526 432 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 PAX6P26367 422 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 PCGF2P35227 344 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 EIF1P41567 113 aaKnown RBP2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SLC1A3P43003 542 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 MAGEA8P43361 318 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 GSK3BP49841 420 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SLC7A2P52569 658 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CRISP3P54108 245 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 FXYD6P3P58550 94 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 STX1BP61266 288 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 NCALDP61601 193 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SLC35A1P78382 337 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 RPL18Q07020 188 aaKnown RBP2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CBX3Q13185 183 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF146Q15072 292 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 NRF1Q16656 503 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CYBRD1Q53TN4 286 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TIMM23BQ5SRD1 257 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 RNLSQ5VYX0 342 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM225Q6GV28 225 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 C1orf94Q6P1W5 598 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DUX4L9Q6RFH8 374 aaPredicted RBP2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CENPVQ7Z7K6 275 aaPredicted RBP2.33□□□□□ -2.04
PTCD3-218ENST00000493430 BIVMQ86UB2 503 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CALHM3Q86XJ0 350 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 MISPQ8IVT2 679 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TIGD4Q8IY51 512 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF101Q8IZC7 436 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 BATF2Q8N1L9 274 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 NOXO1Q8NFA2 376 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 STEAP2Q8NFT2 490 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 OR4K5Q8NGD3 323 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 OR4D10Q8NGI6 311 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 OR51A7Q8NH64 312 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 C10orf105Q8TEF2 133 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DDIT4LQ96D03 193 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 MAGEB18Q96M61 343 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 Q96M85 177 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ANKRD27Q96NW4 1050 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 MUS81Q96NY9 551 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SLC38A2Q96QD8 506 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CGREF1Q99674 301 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 GPA33Q99795 319 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DHRS9Q9BPW9 319 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 KCNS3Q9BQ31 491 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SPXQ9BT56 116 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ULBP2Q9BZM5 246 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 EXOSC3Q9NQT5 275 aaKnown RBP2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SAR1AQ9NR31 198 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CA10Q9NS85 328 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 CBLN4Q9NTU7 201 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TAS2R16Q9NYV7 291 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TAS2R5Q9NYW4 299 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 ADA2Q9NZK5 511 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 RPS6KB2Q9UBS0 482 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 DUX4Q9UBX2 424 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SLC9A8Q9Y2E8 581 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 SH3GLB1Q9Y371 365 aa2.33□□□□□ -2.04
PTCD3-218ENST00000493430 TRAV36DV7A0A075B6V5 113 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TRBV5-5A0A0J9YX44 114 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PPW3 197 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PRV1 198 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 GJE1A6NN92 205 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 A8MVM7 634 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 H0YL77 283 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 H3BSH0 61 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SLC33A1O00400 549 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 PLPP3O14495 311 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SURF4O15260 269 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 RNF13O43567 381 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 CD5LO43866 347 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ERLIN1O75477 346 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 FCN3O75636 299 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NXPH4O95158 308 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 VENTXO95231 258 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SOX14O95416 240 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 AK1P00568 194 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SERPINA1P01009 418 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 GYPBP06028 91 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 VIMP08670 466 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZCCHC18P0CG32 403 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 PGA4P0DJD7 388 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 PGA3P0DJD8 388 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR8G3PP0DMU2 310 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 CLUP10909 449 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF14P17017 642 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF43P17038 809 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms