RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OR2AE1Q8NHA4 323 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 C8orf46Q8TAG6 207 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF671Q8TAW3 534 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 LHX4Q969G2 390 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 TMEM80Q96HE8 168 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-212ENST00000492407 SMURF1Q9HCE7 757 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF391Q9UJN7 358 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 FAM96BQ9Y3D0 163 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 hCG_1807616A0A1W2PRN6 198 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 TMEM82A0PJX8 343 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 PQLC2LA1A4F0 135 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 RAB19A4D1S5 217 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 C5orf63A6NC05 138 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 SLC22A31A6NKX4 558 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 A6NLC8 198 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 NUDT19A8MXV4 375 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 TNFRSF11BO00300 401 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 NDUFB3O43676 98 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 CCNKO75909 580 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 SCAF4O95104 1147 aaKnown RBP7.52□□□□□ -1.21
HDAC3-212ENST00000492407 IFNGP01579 166 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 GYPAP02724 150 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 EEF1B2P24534 225 aaKnown RBP7.52□□□□□ -1.21
HDAC3-212ENST00000492407 PYCR1P32322 319 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 TGFBR2P37173 567 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 MAGEA2P43356 314 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 FAM3AP98173 230 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 IL5RAQ01344 420 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 ACSM1Q08AH1 577 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 CD300LDQ6UXZ3 194 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 SHFQ7M4L6 423 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 SLC16A9Q7RTY1 509 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 DPY19L4Q7Z388 723 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 BOLLQ8N9W6 283 aaKnown RBP7.52□□□□□ -1.21
HDAC3-212ENST00000492407 BBS1Q8NFJ9 593 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 OR2T33Q8NG76 320 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 RNF133Q8WVZ7 376 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 RBM4BQ9BQ04 359 aaKnown RBP7.52□□□□□ -1.21
HDAC3-212ENST00000492407 DGCR6LQ9BY27 220 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 FN3KQ9H479 309 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 EGLN3Q9H6Z9 239 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 METTL8Q9H825 291 aaKnown RBP7.52□□□□□ -1.21
HDAC3-212ENST00000492407 SLC35D1Q9NTN3 355 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 AASSQ9UDR5 926 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 PRELID3BQ9Y3B1 194 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 MPC1Q9Y5U8 109 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 LYVE1Q9Y5Y7 322 aa7.52□□□□□ -1.21
HDAC3-212ENST00000492407 hCG_38984A0A1B0GV85 526 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 DHRS12A0PJE2 317 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 PGPEP1LA6NFU8 196 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 TVP23AA6NH52 213 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ANXA2P2A6NMY6 339 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 H0Y8G0 127 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 M0R1W7 72 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ARPC2O15144 300 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 FCN3O75636 299 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 CCNB2O95067 398 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 CST4P01036 141 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 GASTP01350 101 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 SPARCP09486 303 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 SPI1P17947 270 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 VHLP40337 213 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 PRKXP51817 358 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 UBE2E1P51965 193 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 RIDAP52758 137 aaKnown RBP7.51□□□□□ -1.21
HDAC3-212ENST00000492407 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-212ENST00000492407 TIGD6Q17RP2 521 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 LRRC10Q5BKY1 277 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 WDR38Q5JTN6 314 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 C16orf89Q6UX73 402 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 WDR82Q6UXN9 313 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF826PQ6ZT77 177 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 PRSS45Q7RTY3 260 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 VMO1Q7Z5L0 202 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ERI1Q8IV48 349 aaKnown RBP7.51□□□□□ -1.21
HDAC3-212ENST00000492407 RNF148Q8N7C7 305 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 OR4D10Q8NGI6 311 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 LRRC29Q8WV35 223 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ZNRF4Q8WWF5 429 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ST8SIA4Q92187 359 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 TAF15Q92804 592 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC3-212ENST00000492407 UBE2FQ969M7 185 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 MICU1Q9BPX6 476 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 TSSK6Q9BXA6 273 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 OR10A2Q9H208 303 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 MAGIXQ9H6Y5 334 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 CMC2Q9NRP2 79 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 TNFRSF19Q9NS68 423 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 CENPMQ9NSP4 180 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 ZNRD1Q9P1U0 126 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 VPREB3Q9UKI3 123 aa7.51□□□□□ -1.21
HDAC3-212ENST00000492407 TGP01266 2768 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms