RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 TACSTD2P09758 323 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 PMCHP20382 165 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 GABRR2P28476 465 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 MPV17P39210 176 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 CMC4P56277 68 aaPredicted RBP2.02□□□□□ -2.09
VTA1-204ENST00000491881 CLDN6P56747 220 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 ATP6V0D1P61421 351 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 RBX1P62877 108 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 FLI1Q01543 452 aaPredicted RBP2.02□□□□□ -2.09
VTA1-204ENST00000491881 BTN1A1Q13410 526 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 MAD2L1BPQ15013 274 aaPredicted RBP2.02□□□□□ -2.09
VTA1-204ENST00000491881 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 TPRG1LQ5T0D9 272 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 PIP5KL1Q5T9C9 394 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 ULK3Q6PHR2 472 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 NDUFAF7Q7L592 441 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 PROKR2Q8NFJ6 384 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 OR1P1Q8NH06 330 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 RXFP2Q8WXD0 754 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 NAT6Q93015 286 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 C18orf15Q96N68 181 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 RDH12Q96NR8 316 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 NAA50Q9GZZ1 169 aaKnown RBP2.02□□□□□ -2.09
VTA1-204ENST00000491881 FBXO8Q9NRD0 319 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 RABL2AQ9UBK7 228 aaPredicted RBP2.02□□□□□ -2.09
VTA1-204ENST00000491881 SIGLEC7Q9Y286 467 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 BOD1L1Q8NFC6 3051 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 GLI3P10071 1580 aa2.02□□□□□ -2.09
VTA1-204ENST00000491881 ABCC3O15438 1527 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 SPTAN1Q13813 2472 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 WDR87Q6ZQQ6 2873 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 SETD5Q9C0A6 1442 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 TUBGCP6Q96RT7 1819 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 TTC41PQ6P2S7 1318 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 PHLPP2Q6ZVD8 1323 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 RICTORQ6R327 1708 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 A0A1B0GTQ1 180 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 ISPDA4D126 451 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 SLC22A20A6NK97 555 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 HACD1B0YJ81 288 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 PRAMEF26H0Y7S4 382 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 MFNGO00587 321 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 PSPHP1O15172 72 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 CASC3O15234 703 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 AKR7A2O43488 359 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 UPK1BO75841 260 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 LCA5LO95447 670 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 MAS1P04201 325 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 CD28P10747 220 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 SFTPCP11686 197 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 NTF3P20783 257 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 IDH2P48735 452 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 PSMD4P55036 377 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 CLDN8P56748 225 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 WDR43Q15061 677 aaKnown RBP eCLIP2.01□□□□□ -2.09
VTA1-204ENST00000491881 TSC22D1Q15714 1073 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 TMEM236Q5W0B7 351 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 THOC7Q6I9Y2 204 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 STK40Q8N2I9 435 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 SFXN5Q8TD22 340 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 PEX13Q92968 403 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 ISG20Q96AZ6 181 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 SNF8Q96H20 258 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 ALS2CR12Q96Q35 445 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 BLZF1Q9H2G9 400 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 DYRK4Q9NR20 520 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 CES1P1Q9UKY3 287 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 PSME2Q9UL46 239 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 NDRG2Q9UN36 371 aaKnown RBP2.01□□□□□ -2.09
VTA1-204ENST00000491881 PBRM1Q86U86 1689 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 ZFYVE16Q7Z3T8 1539 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 DMXL1Q9Y485 3027 aa2.01□□□□□ -2.09
VTA1-204ENST00000491881 PREX2Q70Z35 1606 aa2□□□□□ -2.09
VTA1-204ENST00000491881 A8MWL6 223 aa2□□□□□ -2.09
VTA1-204ENST00000491881 H3BN98 237 aa2□□□□□ -2.09
VTA1-204ENST00000491881 OR7C2O60412 319 aa2□□□□□ -2.09
VTA1-204ENST00000491881 TTC4O95801 387 aa2□□□□□ -2.09
VTA1-204ENST00000491881 IGLV2-8P01709 118 aa2□□□□□ -2.09
VTA1-204ENST00000491881 THRAP10827 490 aa2□□□□□ -2.09
VTA1-204ENST00000491881 CXCR1P25024 350 aa2□□□□□ -2.09
VTA1-204ENST00000491881 PRSS3P35030 304 aa2□□□□□ -2.09
VTA1-204ENST00000491881 ARL2P36404 184 aa2□□□□□ -2.09
VTA1-204ENST00000491881 CCT6AP40227 531 aaKnown RBP2□□□□□ -2.09
VTA1-204ENST00000491881 PPP1CAP62136 330 aa2□□□□□ -2.09
VTA1-204ENST00000491881 INCA1Q0VD86 236 aa2□□□□□ -2.09
VTA1-204ENST00000491881 IL15RAQ13261 267 aa2□□□□□ -2.09
VTA1-204ENST00000491881 IGFBP7Q16270 282 aa2□□□□□ -2.09
VTA1-204ENST00000491881 HIKESHIQ53FT3 197 aa2□□□□□ -2.09
VTA1-204ENST00000491881 C16orf47Q6ZP98 133 aaPredicted RBP2□□□□□ -2.09
VTA1-204ENST00000491881 ORMDL3Q8N138 153 aa2□□□□□ -2.09
VTA1-204ENST00000491881 SLC25A29Q8N8R3 303 aa2□□□□□ -2.09
VTA1-204ENST00000491881 WDR31Q8NA23 367 aa2□□□□□ -2.09
VTA1-204ENST00000491881 ZNF680Q8NEM1 530 aa2□□□□□ -2.09
VTA1-204ENST00000491881 C1orf64Q8NEQ6 169 aa2□□□□□ -2.09
VTA1-204ENST00000491881 ING5Q8WYH8 240 aa2□□□□□ -2.09
VTA1-204ENST00000491881 TMEM175Q9BSA9 504 aa2□□□□□ -2.09
VTA1-204ENST00000491881 NCOR1P1Q9H4R4 102 aa2□□□□□ -2.09
VTA1-204ENST00000491881 DHX35Q9H5Z1 703 aaKnown RBP2□□□□□ -2.09
VTA1-204ENST00000491881 HEBP1Q9NRV9 189 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms