RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 GHRLQ9UBU3 117 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
C9orf3-221ENST00000489562 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 CELSR2Q9HCU4 2923 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 hCG_1807616A0A1W2PRN6 198 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 A6NHS1 94 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 IFITM5A6NNB3 132 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 AIPO00170 330 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 CDIPTO14735 213 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 HPXP02790 462 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 UBBP0CG47 229 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 TMEM225BP0DP42 221 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 HTR2CP28335 458 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 RPS19P39019 145 aaKnown RBP11.73□□□□□ -0.53
C9orf3-221ENST00000489562 MXD1Q05195 221 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 MPPED2Q15777 294 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 RAB11BQ15907 218 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 HFEQ30201 348 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 CRIP3Q6Q6R5 217 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 SLC25A26Q70HW3 274 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 ANGPTL5Q86XS5 388 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 C11orf53Q8IXP5 236 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 Q8IYB0 196 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 TNFAIP8L1Q8WVP5 186 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 NRGNQ92686 78 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 RFT1Q96AA3 541 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 MBD6Q96DN6 1003 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 GSX2Q9BZM3 304 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 CNTD2Q9H8S5 307 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 UFSP2Q9NUQ7 469 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 C1orf123Q9NWV4 160 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 RNF7Q9UBF6 113 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 PLEKHA6Q9Y2H5 1048 aa11.73□□□□□ -0.53
C9orf3-221ENST00000489562 MRPS28Q9Y2Q9 187 aaKnown RBP11.73□□□□□ -0.53
C9orf3-221ENST00000489562 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 A0A0G2JK05 382 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 TRAPPC2LH3BP13 241 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 NOS1APO75052 506 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-221ENST00000489562 ZNF780AO75290 641 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-221ENST00000489562 PLATP00750 562 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 CSF3P09919 207 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 DAOP14920 347 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 OR3A4PP47883 348 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 PTH2RP49190 550 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 BMXP51813 675 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 OR10A3P58181 314 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 GPR176Q14439 515 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 SPCS2Q15005 226 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 SPRNQ5BIV9 151 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 AWAT2Q6E213 333 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 SFXN4Q6P4A7 337 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 ASCL4Q6XD76 172 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 OR5D18Q8NGL1 313 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 OR51F2Q8NH61 342 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 NDNFQ8TB73 568 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 TBC1D15Q8TC07 691 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 LURAP1Q96LR2 239 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 MRI1Q9BV20 369 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 METTL9Q9H1A3 318 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 SMURF1Q9HCE7 757 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 IL36GQ9NZH8 169 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 STEAP1Q9UHE8 339 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 NPTNQ9Y639 398 aa11.72□□□□□ -0.53
C9orf3-221ENST00000489562 SRRM5B3KS81 715 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-221ENST00000489562 SYNGR1O43759 233 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 BPNT1O95861 308 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 CLEC2LP0C7M8 214 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 PGA5P0DJD9 388 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 SOX6P35712 828 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 RORCP51449 518 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 ATP5J2P56134 94 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 SCAND1P57086 179 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 HNRNPA0Q13151 305 aaKnown RBP11.71□□□□□ -0.53
C9orf3-221ENST00000489562 RSU1Q15404 277 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 ZNF826PQ6ZT77 177 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 LRRC75A-AS1Q8N1F1 130 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 POC1AQ8NBT0 407 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 OR4D6Q8NGJ1 314 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 KCTD12Q96CX2 325 aaKnown RBP11.71□□□□□ -0.53
C9orf3-221ENST00000489562 CEP19Q96LK0 163 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 RASL12Q9NYN1 266 aa11.71□□□□□ -0.53
C9orf3-221ENST00000489562 APCP25054 2843 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 CYSRT1A8MQ03 144 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 CDC14BO60729 498 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 RP2O75695 350 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 RHBDL1O75783 438 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 KDM4BO94953 1096 aa11.7□□□□□ -0.54
C9orf3-221ENST00000489562 FSTL3O95633 263 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms