RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 WDR13Q9H1Z4 485 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 HES4Q9HCC6 221 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 PCDHB10Q9UN67 800 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 ERGIC3Q9Y282 383 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF281Q9Y2X9 895 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 CUBNO60494 3623 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 PTGES3LE9PB15 166 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 AKR7A2O43488 359 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 NDUFA2O43678 99 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 FOXH1O75593 365 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF20P17024 532 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 HOXB4P17483 251 aaPredicted RBP15.54■□□□□ 0.08
PTCD3-217ENST00000488801 AMY2BP19961 511 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 ERVK11-1P61568 191 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 IL24Q13007 206 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 ATPAF1Q5TC12 328 aaPredicted RBP15.54■□□□□ 0.08
PTCD3-217ENST00000488801 PRSS48Q7RTY5 328 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 ZFP41Q8N8Y5 198 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 DEFB108BQ8NET1 73 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 TRMT10AQ8TBZ6 339 aaKnown RBP15.54■□□□□ 0.08
PTCD3-217ENST00000488801 GPR148Q8TDV2 347 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 NPRL2Q8WTW4 380 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 SPSB1Q96BD6 273 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 OR5M11Q96RB7 305 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 DNTTIP1Q9H147 329 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 HIF1ANQ9NWT6 349 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF222Q9UK12 451 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 SLC7A11Q9UPY5 501 aa15.54■□□□□ 0.08
PTCD3-217ENST00000488801 IGHV3OR15-7A0A075B7D8 119 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 RGS10O43665 173 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 CRLF1O75462 422 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 SERPINA3P01011 423 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 AZGP1P25311 298 aaKnown RBP15.53■□□□□ 0.08
PTCD3-217ENST00000488801 MICBQ29980 383 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 YIF1BQ5BJH7 314 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 BOLLQ8N9W6 283 aaKnown RBP15.53■□□□□ 0.08
PTCD3-217ENST00000488801 OR8B3Q8NGG8 313 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 ANGPTL6Q8NI99 470 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF671Q8TAW3 534 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 GHSRQ92847 366 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 OPALINQ96PE5 141 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 OR8B2Q96RD0 313 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 NRIP2Q9BQI9 281 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 SSBP3Q9BWW4 388 aaPredicted RBP15.53■□□□□ 0.08
PTCD3-217ENST00000488801 RASSF4Q9H2L5 321 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 ZCCHC4Q9H5U6 513 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 LPAR2Q9HBW0 351 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 DHDHQ9UQ10 334 aa15.53■□□□□ 0.08
PTCD3-217ENST00000488801 GYPAP02724 150 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 PRKACBP22694 351 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 PITPNBP48739 271 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 GABARAPL2P60520 117 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 LCN2P80188 198 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 CR1LQ2VPA4 569 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 ESCO2Q56NI9 601 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 WDR25Q64LD2 544 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-217ENST00000488801 LHFPL2Q6ZUX7 228 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 NLRC3Q7RTR2 1065 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 SERPINA12Q8IW75 414 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 OR13C5Q8NGS8 318 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 OR13C9Q8NGT0 318 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 TSEN15Q8WW01 171 aaKnown RBP15.52■□□□□ 0.08
PTCD3-217ENST00000488801 BORCS8Q96FH0 119 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 Q9H521 79 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 SMURF1Q9HCE7 757 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 RASL12Q9NYN1 266 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 POLDIP2Q9Y2S7 368 aa15.52■□□□□ 0.08
PTCD3-217ENST00000488801 FAM230AA0A1W2PPH8 454 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 TRAPPC2LH3BP13 241 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 SULT1B1O43704 296 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 GLRA1P23415 457 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 RBP2P50120 134 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 NPY4RP50391 375 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 SPHARQ15513 63 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 TBCEQ15813 527 aaPredicted RBP15.51■□□□□ 0.07
PTCD3-217ENST00000488801 FAM120AOSQ5T036 256 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 ACP7Q6ZNF0 438 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 ZNF788Q6ZQV5 615 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 RNF144BQ7Z419 303 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 ANGPTL5Q86XS5 388 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 TMEM106AQ96A25 262 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 TMPRSS13Q9BYE2 586 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 NLKQ9UBE8 527 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 BLOC1S6Q9UL45 172 aa15.51■□□□□ 0.07
PTCD3-217ENST00000488801 KIAA2026Q5HYC2 2103 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 IGKV1D-17A0A075B6S4 117 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 TRBV5-7A0A0A0MS05 114 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 A0A1B0GW55 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 PHF1O43189 567 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-217ENST00000488801 ADAM20O43506 726 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L2P0CJ85 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L3P0CJ86 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L4P0CJ87 422 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L5P0CJ88 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L6P0CJ89 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L7P0CJ90 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 CELP19835 753 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 FSTP19883 344 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 PCMT1P22061 227 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 GATA3P23771 443 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms