RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 FAM32AQ9Y421 112 aaKnown RBP7.33□□□□□ -1.24
COL17A1-207ENST00000488320 PLECQ15149 4684 aaKnown RBP7.33□□□□□ -1.24
COL17A1-207ENST00000488320 SERPINE3A8MV23 424 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 M0QZK8 103 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF593O00488 134 aaPredicted RBP7.32□□□□□ -1.24
COL17A1-207ENST00000488320 DNAJC8O75937 253 aaPredicted RBP7.32□□□□□ -1.24
COL17A1-207ENST00000488320 CST4P01036 141 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 H1F0P07305 194 aaKnown RBP7.32□□□□□ -1.24
COL17A1-207ENST00000488320 FRMD6-AS1P0C7T7 363 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 FMO3P31513 532 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 DCTDP32321 178 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 DLX6P56179 175 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF121P58317 390 aaPredicted RBP7.32□□□□□ -1.24
COL17A1-207ENST00000488320 GNG3P63215 75 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 SNAPC1Q16533 368 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 SMIM21Q3B7S5 101 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 HAGHLQ6PII5 290 aaPredicted RBP7.32□□□□□ -1.24
COL17A1-207ENST00000488320 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 ZBTB49Q6ZSB9 765 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 CROCCP2Q86T23 111 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 FAM86B1Q8N7N1 296 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 OR2T12Q8NG77 320 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 OR8J3Q8NGG0 315 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF488Q96MN9 340 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 NOL4LQ96MY1 436 aaPredicted RBP7.32□□□□□ -1.24
COL17A1-207ENST00000488320 C7orf26Q96N11 449 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 OR51I2Q9H344 312 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 OR52D1Q9H346 318 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 LINC00527Q9UJ94 153 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 LYVE1Q9Y5Y7 322 aa7.32□□□□□ -1.24
COL17A1-207ENST00000488320 IGHV2-26A0A0B4J1V2 119 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 FAM220BPB1ANY3 271 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 GSTA4O15217 222 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 IDH3BO43837 385 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 RBP4P02753 201 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 AMY1AP04745 511 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 AMY2AP04746 511 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 PSKH1P11801 424 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 ACKR3P25106 362 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 DEFB136Q30KP8 78 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 CEP78Q5JTW2 689 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 FAM27D1Q5T7N8 215 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 LHFPL2Q6ZUX7 228 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 MOB3CQ70IA8 216 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 GDPD3Q7L5L3 318 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 BATF2Q8N1L9 274 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 COMMD1Q8N668 190 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 ASCC1Q8N9N2 400 aaKnown RBP7.31□□□□□ -1.24
COL17A1-207ENST00000488320 OR2T4Q8NH00 348 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 OR4Q3Q8NH05 313 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 OR8U1Q8NH10 309 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 OR52J3Q8NH60 311 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 FAM81AQ8TBF8 368 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 ZNRF4Q8WWF5 429 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 HPSE2Q8WWQ2 592 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 AQP3Q92482 292 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF714Q96N38 554 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 CLEC7AQ9BXN2 247 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 FGF23Q9GZV9 251 aaPredicted RBP7.31□□□□□ -1.24
COL17A1-207ENST00000488320 TMEM133Q9H2Q1 129 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 RGCCQ9H4X1 137 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 DCLRE1BQ9H816 532 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF319Q9P2F9 582 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 DPM3Q9P2X0 92 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 SESN1Q9Y6P5 492 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 COMMD3-BMI1R4GMX3 469 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 SORL1Q92673 2214 aa7.31□□□□□ -1.24
COL17A1-207ENST00000488320 A0A1W2PRQ8 180 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 DHRS12A0PJE2 317 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 NXPH2O95156 264 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 MAGOHP61326 146 aaKnown RBP7.3□□□□□ -1.24
COL17A1-207ENST00000488320 DGCR6Q14129 220 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 KIR2DS1Q14954 304 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.3□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 POC1AQ8NBT0 407 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 OR5A2Q8NGI9 324 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 TRMT10AQ8TBZ6 339 aaKnown RBP7.3□□□□□ -1.24
COL17A1-207ENST00000488320 RNFT2Q96EX2 444 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 HSH2DQ96JZ2 352 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 OR8B4Q96RC9 309 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 VIPAS39Q9H9C1 493 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 EDA2RQ9HAV5 297 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 MOB4Q9Y3A3 225 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 SIRT4Q9Y6E7 314 aaPredicted RBP7.3□□□□□ -1.24
COL17A1-207ENST00000488320 ENPP4Q9Y6X5 453 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 HSPE1-MOB4S4R3N1 261 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 HERC2O95714 4834 aa7.3□□□□□ -1.24
COL17A1-207ENST00000488320 TRBV4-1A0A0J9YWV2 114 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 hADV38S2A0JD32 116 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 LEUTXA8MZ59 168 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 K7N7A8 449 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 LDLRAD4O15165 306 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 SLC25A17O43808 307 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 SERPINA1P01009 418 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 NPPAP01160 153 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 H2BFMP0C1H6 154 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 MNDAP41218 407 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 INSL3P51460 131 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 EDDM3AQ14507 147 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms