RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 CCDC54Q8NEL0 328 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 OR13C5Q8NGS8 318 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 RGP1Q92546 391 aaPredicted RBP17.03■□□□□ 0.32
TRIM8-204ENST00000487927 CMTM3Q96MX0 182 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 ATF6BQ99941 703 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 CCDC32Q9BV29 185 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 C7orf69Q9H7B7 122 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 NOX4Q9NPH5 578 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 CENPMQ9NSP4 180 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 HHLA2Q9UM44 414 aa17.03■□□□□ 0.32
TRIM8-204ENST00000487927 SHISA3A0PJX4 238 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 TNFSF8P32971 234 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 RANBP1P43487 201 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 ECH1Q13011 328 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 ZMYND11Q15326 602 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 TAF13Q15543 124 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 ZNF181Q2M3W8 571 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 TMEM155Q4W5P6 130 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 OR2T2Q6IF00 324 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 LRRC28Q86X40 367 aaPredicted RBP17.02■□□□□ 0.32
TRIM8-204ENST00000487927 OR2V2Q96R30 315 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 PATZ1Q9HBE1 687 aaKnown RBP17.02■□□□□ 0.32
TRIM8-204ENST00000487927 TCF7L1Q9HCS4 588 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 FAM206AQ9NX38 181 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 RABL2AQ9UBK7 228 aaPredicted RBP17.02■□□□□ 0.32
TRIM8-204ENST00000487927 NUFIP1Q9UHK0 495 aaKnown RBP17.02■□□□□ 0.32
TRIM8-204ENST00000487927 RABL2BQ9UNT1 228 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 PPP1R3CQ9UQK1 317 aa17.02■□□□□ 0.32
TRIM8-204ENST00000487927 PPIAL4EA0A075B759 164 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 PPIAL4CA0A0B4J2A2 164 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 PPIAL4DF5H284 164 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 CTDSP2O14595 271 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 FOXH1O75593 365 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 PPIAL4FP0DN26 164 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 ZNF12P17014 697 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 FSTP19883 344 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 SCAND1P57086 179 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 SEC61A1P61619 476 aaKnown RBP17.01■□□□□ 0.31
TRIM8-204ENST00000487927 BTG1P62324 171 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 KRTAP27-1Q3LI81 207 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 CFAP77Q6ZQR2 320 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 NANPQ8TBE9 248 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 TSEN15Q8WW01 171 aaKnown RBP17.01■□□□□ 0.31
TRIM8-204ENST00000487927 APOBEC3DQ96AK3 386 aaPredicted RBP17.01■□□□□ 0.31
TRIM8-204ENST00000487927 KCNJ15Q99712 375 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 SLC6A7Q99884 636 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 HDHD2Q9H0R4 259 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 PPIL3Q9H2H8 161 aaKnown RBP17.01■□□□□ 0.31
TRIM8-204ENST00000487927 MMP26Q9NRE1 261 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 FOXJ3Q9UPW0 622 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 POLR3KQ9Y2Y1 108 aaPredicted RBP17.01■□□□□ 0.31
TRIM8-204ENST00000487927 DOCK11Q5JSL3 2073 aa17.01■□□□□ 0.31
TRIM8-204ENST00000487927 A0A0G2JK05 382 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 F5H0A9 414 aaPredicted RBP17■□□□□ 0.31
TRIM8-204ENST00000487927 H0YL77 283 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 TRAPPC2LH3BP13 241 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 MFGE8Q08431 387 aaPredicted RBP17■□□□□ 0.31
TRIM8-204ENST00000487927 FAM27D1Q5T7N8 215 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 C12orf54Q6X4T0 127 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 COLCA1Q6ZS62 124 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 ELMOD2Q8IZ81 293 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 SPICQ8N5J4 248 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 PARP16Q8N5Y8 322 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 MINDY2Q8NBR6 621 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 DEFB108BQ8NET1 73 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 OR8G5Q8NG78 346 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 OR10AD1Q8NGE0 317 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 OR5L1Q8NGL2 311 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 OR10S1Q8NGN2 331 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 SP140LQ9H930 580 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 GCM1Q9NP62 436 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 PNRC2Q9NPJ4 139 aaKnown RBP17■□□□□ 0.31
TRIM8-204ENST00000487927 ESM1Q9NQ30 184 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 GTF2A1LQ9UNN4 478 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 DHDHQ9UQ10 334 aa17■□□□□ 0.31
TRIM8-204ENST00000487927 TMEM178BH3BS89 294 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 J3QRK9 145 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 MLNRO43193 412 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 CFPP27918 469 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 SLC6A9P48067 706 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 SPATC1Q76KD6 591 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 LAX1Q8IWV1 398 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 FAM216AQ8WUB2 273 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 DVL3Q92997 716 aaPredicted RBP16.99■□□□□ 0.31
TRIM8-204ENST00000487927 TMEM106AQ96A25 262 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 MEGF10Q96KG7 1140 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 SUCNR1Q9BXA5 334 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 ABCB9Q9NP78 766 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 CKLFQ9UBR5 152 aa16.99■□□□□ 0.31
TRIM8-204ENST00000487927 MEGF11A6BM72 1044 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 A8MXK9 166 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 TRIM77I1YAP6 450 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 PIN1P1O15428 100 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 UPK1BO75841 260 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 COMPP49747 757 aaPredicted RBP16.98■□□□□ 0.31
TRIM8-204ENST00000487927 TUSC1Q2TAM9 212 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 IDNKQ5T6J7 187 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 SPTSSAQ969W0 71 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 C1QTNF5Q9BXJ0 243 aa16.98■□□□□ 0.31
TRIM8-204ENST00000487927 PBOV1Q9GZY1 135 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms