RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CYYR1Q96J86 154 aa22.76■■□□□ 1.23
HLA-C-208ENST00000487245 ADAP1O75689 374 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 PET100P0DJ07 73 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 SERPINA2P20848 420 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 CHRFAM7AQ494W8 412 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 FAM122CQ6P4D5 195 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 SULF2Q8IWU5 870 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 NPRL2Q8WTW4 380 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 ROBO4Q8WZ75 1007 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 PSMF1Q92530 271 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 LRRC46Q96FV0 321 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 DEPPQ9NTK1 212 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 CYTIPO60759 359 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 CTRB1P17538 263 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 KRTAP27-1Q3LI81 207 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 CTRB2Q6GPI1 263 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 RNF141Q8WVD5 230 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 LOXL4Q96JB6 756 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 Q96M66 194 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 GPR87Q9BY21 358 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 SLC6A15Q9H2J7 730 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 TIMM10BQ9Y5J6 103 aa22.75■■□□□ 1.23
HLA-C-208ENST00000487245 SNAI3Q3KNW1 292 aa22.74■■□□□ 1.23
HLA-C-208ENST00000487245 THOC3Q96J01 351 aaKnown RBP22.74■■□□□ 1.23
HLA-C-208ENST00000487245 DECR2Q9NUI1 292 aa22.74■■□□□ 1.23
HLA-C-208ENST00000487245 C14orf166Q9Y224 244 aaKnown RBP22.74■■□□□ 1.23
HLA-C-208ENST00000487245 OR6C6A6NF89 314 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 SDCBPO00560 298 aaPredicted RBP22.73■■□□□ 1.23
HLA-C-208ENST00000487245 GLRA1P23415 457 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 NTF4P34130 210 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 GFRA1P56159 465 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 REEP6Q96HR9 211 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 OR10C1Q96KK4 312 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 FOXB1Q99853 325 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 ASF1BQ9NVP2 202 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 EDARQ9UNE0 448 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 MEMO1Q9Y316 297 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 TOR1AO14656 332 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 HTR3BO95264 441 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 PI3P19957 117 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 AIMP2Q13155 320 aaKnown RBP22.73■■□□□ 1.23
HLA-C-208ENST00000487245 CNN3Q15417 329 aaKnown RBP22.73■■□□□ 1.23
HLA-C-208ENST00000487245 CCDC157Q569K6 752 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 ZNF774Q6NX45 483 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 TMEM45BQ96B21 275 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 FAM173AQ9BQD7 235 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 OR5AC2Q9NZP5 309 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 LRFN1Q9P244 771 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 HSF4Q9ULV5 492 aa22.73■■□□□ 1.23
HLA-C-208ENST00000487245 C21orf140B9A014 251 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 C9orf172C9J069 976 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 CSTBP04080 98 aaKnown RBP22.72■■□□□ 1.23
HLA-C-208ENST00000487245 SP9P0CG40 484 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 FOXO1Q12778 655 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 TMEM164Q5U3C3 297 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 PIGTQ969N2 578 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 RGCCQ9H4X1 137 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 METTL8Q9H825 291 aaKnown RBP22.72■■□□□ 1.23
HLA-C-208ENST00000487245 GPR35Q9HC97 309 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 ABI3Q9P2A4 366 aa22.72■■□□□ 1.23
HLA-C-208ENST00000487245 TMEM218A2RU14 115 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 KCNAB3O43448 404 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 CTSDP07339 412 aaPredicted RBP22.71■■□□□ 1.23
HLA-C-208ENST00000487245 ZNF32P17041 273 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 PLXDC2Q6UX71 529 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 ASCL4Q6XD76 172 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 ARL11Q969Q4 196 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 NKX6-2Q9C056 277 aaPredicted RBP22.71■■□□□ 1.23
HLA-C-208ENST00000487245 METTL9Q9H1A3 318 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 ELL3Q9HB65 397 aaPredicted RBP22.71■■□□□ 1.23
HLA-C-208ENST00000487245 SDK2Q58EX2 2172 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 TECTAO75443 2155 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 MSGN1A6NI15 193 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 LCATP04180 440 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 FAM157CP0CG43 387 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 PTGER4P35408 488 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 MTCP1P56278 107 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 CEACAM16Q2WEN9 425 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 NKAPLQ5M9Q1 402 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 GALNTL5Q7Z4T8 443 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 OR5T2Q8NGG2 359 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 SLC5A7Q9GZV3 580 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 ZC4H2Q9NQZ6 224 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 GPR173Q9NS66 373 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 C1orf123Q9NWV4 160 aa22.71■■□□□ 1.23
HLA-C-208ENST00000487245 MCTS1Q9ULC4 181 aaKnown RBP22.71■■□□□ 1.23
HLA-C-208ENST00000487245 PMS2P1A4D2B8 440 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 PINLYPA6NC86 204 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 TAAR5O14804 337 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 ATG12O94817 140 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 IFNA2P01563 188 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 HTR5AP47898 357 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 CLDN15P56746 228 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 EIF5AP63241 154 aaKnown RBP22.7■■□□□ 1.22
HLA-C-208ENST00000487245 DEFA5Q01523 94 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 NRN1LQ496H8 165 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 C10orf91Q5T1B1 145 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 ABHD17BQ5VST6 288 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 ZNF100Q8IYN0 542 aa22.7■■□□□ 1.22
HLA-C-208ENST00000487245 AIFM2Q9BRQ8 373 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms