RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 LINC00303Q3SY05 128 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 UBE2UQ5VVX9 321 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 C12orf54Q6X4T0 127 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 FBXW12Q6X9E4 464 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 TMEM25Q86YD3 366 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 BBS7Q8IWZ6 715 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 DAW1Q8N136 415 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 C8orf31Q8N9H6 132 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 NOXO1Q8NFA2 376 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 OR2A5Q96R48 311 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 SDHCQ99643 169 aaPredicted RBP3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 SLC7A5P2Q9GIP4 190 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 RGCCQ9H4X1 137 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 ACP6Q9NPH0 428 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 ASCL3Q9NQ33 180 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 KLK12Q9UKR0 248 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 ABCA12Q86UK0 2595 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 C2CD3Q4AC94 2353 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 CREBBPQ92793 2442 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 CSMD1Q96PZ7 3565 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 OTOGQ6ZRI0 2925 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 TLN1Q9Y490 2541 aaKnown RBP3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 K7EMT4 169 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 M0QX08 132 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF701M0R085 212 aaPredicted RBP3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 M0R3G1 203 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 SNAI2O43623 268 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 RDH16O75452 317 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 LSM8O95777 96 aaKnown RBP3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 PAHP00439 452 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 OXTP01178 125 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 IGLV3-19P01714 112 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 HLA-DPB1P04440 258 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 BCHEP06276 602 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 CTRB1P17538 263 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 PRKACAP17612 351 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 WARSP23381 471 aaKnown RBP3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 UBE2MP61081 183 aaKnown RBP3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 METTL21CQ5VZV1 264 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 STUMQ69YW2 141 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 CLEC18BQ6UXF7 455 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 NPSR1Q6W5P4 371 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 ZFP2Q6ZN57 461 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 LINC00523Q86TU6 105 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 JAGN1Q8N5M9 183 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 C15orf56Q8N910 161 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 OR56A4Q8NGH8 313 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 ERMNQ8TAM6 284 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 LRRC29Q8WV35 223 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 TMEM230Q96A57 120 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 TMIGD2Q96BF3 282 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 OTUB2Q96DC9 234 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 SEH1LQ96EE3 360 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 PKMYT1Q99640 499 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 BBS2Q9BXC9 721 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 PARP12Q9H0J9 701 aaKnown RBP3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 TMEM38AQ9H6F2 299 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 NTN4Q9HB63 628 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 FAM49BQ9NUQ9 324 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 OR12D3Q9UGF7 316 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 RAB26Q9ULW5 256 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 PTPRJQ12913 1337 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 PDZD2O15018 2839 aa3.11□□□□□ -1.91
PRPF38A-203ENST00000487160 SPTBN1Q01082 2364 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 RP1P56715 2156 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 MED13Q9UHV7 2174 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 NF1P21359 2839 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 NCBP2LA6PVI3 153 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 SIVA1O15304 175 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 COCHO43405 550 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 RAD51CO43502 376 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 ENTPD5O75356 428 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 AQP8O94778 261 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 UBCP0CG48 685 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 MAGP20916 626 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 BMI1P35226 326 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 LONP1P36776 959 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 HADHBP55084 474 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 VSX2P58304 361 aaPredicted RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 XIAPP98170 497 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 LRRC63Q05C16 580 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 SRSF6Q13247 344 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 IGFBP7Q16270 282 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 ASCL4Q6XD76 172 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 TPGS1Q6ZTW0 290 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 MRPL55Q7Z7F7 128 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 NPWQ8N729 165 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 LRRC75AQ8NAA5 344 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 TMEM161BQ8NDZ6 487 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 OR10AD1Q8NGE0 317 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 OR52E2Q8NGJ4 325 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 OR5W2Q8NH69 310 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 APH1BQ8WW43 257 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 TM4SF18Q96CE8 201 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF681Q96N22 645 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 ACBD6Q9BR61 282 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms