RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 AKAP14Q86UN6 197 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 SLC51BQ86UW2 128 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 RAB43Q86YS6 212 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 FAM9CQ8IZT9 166 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF321PQ8N8H1 164 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF615Q8N8J6 731 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 TTLQ8NG68 377 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 RXFP4Q8TDU9 374 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 NAT14Q8WUY8 206 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 BORCS5Q969J3 196 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 SLC25A46Q96AG3 418 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CHMP6Q96FZ7 201 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ATP6V1G3Q96LB4 118 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 BCL7BQ9BQE9 202 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 RSPO3Q9BXY4 272 aaPredicted RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 C6orf62Q9GZU0 229 aaPredicted RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 OR2AG1Q9H205 316 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 HAUS4Q9H6D7 363 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF442Q9H7R0 627 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 FGFR1OP2Q9NVK5 253 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 IFNKQ9P0W0 207 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 RSL24D1Q9UHA3 163 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 STOML2Q9UJZ1 356 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CBY1Q9Y3M2 126 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 AKAP12Q02952 1782 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 EIF4G3O43432 1585 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF608Q9ULD9 1512 aaPredicted RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 AQRO60306 1485 aaKnown RBP eCLIP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 RAPGEF2Q9Y4G8 1499 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CPSF1Q10570 1443 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 YTHDC2Q9H6S0 1430 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 NUP155O75694 1391 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 BCORL1Q5H9F3 1711 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 MYO5CQ9NQX4 1742 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 IGKV1-27A0A075B6S5 117 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF850A8MQ14 1090 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 H3BN98 237 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 SLC22A1O15245 554 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 RRP8O43159 456 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TRAPPC3O43617 180 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CTNSO60931 367 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 SERPINB7O75635 380 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 KLHL2O95198 593 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 RCBTB2O95199 551 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 OR5F1O95221 314 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 IFNA14P01570 189 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 IGLV3-25P01717 112 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 HLA-DRAP01903 254 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 HLA-DQB1P01920 261 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 IFNA16P05015 189 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 KLK1P06870 262 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 PAEPP09466 180 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 FAM228BP0C875 321 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 GZMAP12544 262 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CFL1P23528 166 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 F8A1P23610 371 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CBX5P45973 191 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 RPL5P46777 297 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TAS2R39P59534 338 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TNNC1P63316 161 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 LCN2P80188 198 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 IFITM3Q01628 133 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 RELAQ04206 551 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 GNA13Q14344 377 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 Q3ZCU0 254 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CCDC58Q4VC31 144 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 YIF1BQ5BJH7 314 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CAVIN4Q5BKX8 364 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 MLIPQ5VWP3 458 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 OR2T5Q6IEZ7 315 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CD300LGQ6UXG3 332 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 C4orf22Q6V702 233 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 IDO2Q6ZQW0 420 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 HMGN2P46Q86SG4 172 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 MDP1Q86V88 176 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CTAGE3PQ8IX95 158 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TCAIMQ8N3R3 496 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 MMGT1Q8N4V1 131 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 OR4M1Q8NGD0 313 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 OR5T3Q8NGG3 340 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 OR2T29Q8NH02 315 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 DEDD2Q8WXF8 326 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 GHSRQ92847 366 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 RERGQ96A58 199 aaPredicted RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 KIAA1143Q96AT1 154 aaPredicted RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TMA16Q96EY4 203 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 KCNS1Q96KK3 526 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 BIRC8Q96P09 236 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 DHRS9Q9BPW9 319 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TIMM29Q9BSF4 260 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 MRPS26Q9BYN8 205 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TDRD3Q9H7E2 651 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 REEP1Q9H902 201 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TREX1Q9NSU2 369 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 ADA2Q9NZK5 511 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CFL2Q9Y281 166 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF257Q9Y2Q1 563 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 ARL2BPQ9Y2Y0 163 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 AP4S1Q9Y587 144 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms