RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ACTL9Q8TC94 416 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 ZNF707Q96C28 371 aaPredicted RBP1.81□□□□□ -2.12
LTN1-206ENST00000486427 MRPL48Q96GC5 212 aaKnown RBP1.81□□□□□ -2.12
LTN1-206ENST00000486427 NCOR1P1Q9H4R4 102 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 SLC22A7Q9Y694 548 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 SBNO1A3KN83 1393 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 NEURL4Q96JN8 1562 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 TMEM72A0PK05 275 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 IZUMO1RA6ND01 250 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 ZNF701M0R085 212 aaPredicted RBP1.8□□□□□ -2.12
LTN1-206ENST00000486427 SLC35G6P0C7Q6 338 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 GABRR2P28476 465 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 ARL2P36404 184 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 CFHR2P36980 270 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 KLF3P57682 345 aaPredicted RBP1.8□□□□□ -2.12
LTN1-206ENST00000486427 PAFAH1B2P68402 229 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 SLC35A1P78382 337 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 LCN2P80188 198 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 KRTAP25-1Q3LHN0 102 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 FBXL19-AS1Q494R0 122 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 ULK3Q6PHR2 472 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 OR2W3Q7Z3T1 314 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 SLC7A5P1Q8MH63 180 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 ZCCHC24Q8N2G6 241 aaKnown RBP1.8□□□□□ -2.12
LTN1-206ENST00000486427 PIH1D2Q8WWB5 315 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 OR8D1Q8WZ84 308 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 CERS2Q96G23 380 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 GABRG3Q99928 467 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 IL22Q9GZX6 179 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 BLZF1Q9H2G9 400 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 SND1-IT1Q9HBX3 110 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 TMEM100Q9NV29 134 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 ADA2Q9NZK5 511 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 ZMAT5Q9UDW3 170 aaKnown RBP1.8□□□□□ -2.12
LTN1-206ENST00000486427 PPIL1Q9Y3C6 166 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 PRR14LQ5THK1 2151 aa1.8□□□□□ -2.12
LTN1-206ENST00000486427 SVILO95425 2214 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 IGHV2OR16-5A0A0B4J2B6 119 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 TRDMT1O14717 391 aaKnown RBP1.79□□□□□ -2.12
LTN1-206ENST00000486427 KCNK2O95069 426 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 OR5AC1P0C628 307 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 SRMP19623 302 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 PMCHP20382 165 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 CSKP41240 450 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 MTPNP58546 118 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 FMODQ06828 376 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 PDZD11Q5EBL8 140 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 HHATQ5VTY9 493 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 SLC35D2Q76EJ3 337 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 ZFP62Q8NB50 900 aaPredicted RBP1.79□□□□□ -2.12
LTN1-206ENST00000486427 OR4D6Q8NGJ1 314 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 BAALCQ8WXS3 180 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 TMEM234Q8WY98 164 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 STMN4Q9H169 189 aaPredicted RBP1.79□□□□□ -2.12
LTN1-206ENST00000486427 ABCG5Q9H222 651 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 RGCCQ9H4X1 137 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 RABL2AQ9UBK7 228 aaPredicted RBP1.79□□□□□ -2.12
LTN1-206ENST00000486427 KLF12Q9Y4X4 402 aa1.79□□□□□ -2.12
LTN1-206ENST00000486427 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 SMC2O95347 1197 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 PTTG1O95997 202 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 MSR1P21757 451 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 CCT6AP40227 531 aaKnown RBP1.78□□□□□ -2.12
LTN1-206ENST00000486427 PEX19P40855 299 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 C2orf54Q08AI8 447 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 DOC2AQ14183 400 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 LINC00303Q3SY05 128 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 TTC19Q6DKK2 380 aaPredicted RBP1.78□□□□□ -2.12
LTN1-206ENST00000486427 PDPNQ86YL7 162 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 OTUB2Q96DC9 234 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 ZNF649Q9BS31 505 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 TBL1XR1Q9BZK7 514 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 ARMC7Q9H6L4 198 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 CRLF2Q9HC73 371 aa1.78□□□□□ -2.12
LTN1-206ENST00000486427 COL5A3P25940 1745 aaPredicted RBP1.77□□□□□ -2.13
LTN1-206ENST00000486427 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
LTN1-206ENST00000486427 TRAV8-4A0A0B4J246 113 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 A0A0G2JMP0 313 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 A0A0X1KG70 313 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 A0A1W2PRF3 423 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 A0A1W2PRM7 423 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 D6RAR5 112 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 J3QT63 122 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 DFFAO00273 331 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 GCGP01275 180 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 P01737 135 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 IVDP26440 423 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 HCCSP53701 268 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 PSMD4P55036 377 aaKnown RBP1.77□□□□□ -2.13
LTN1-206ENST00000486427 GRB2P62993 217 aaKnown RBP1.77□□□□□ -2.13
LTN1-206ENST00000486427 MAPRE2Q15555 327 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 MLIPQ5VWP3 458 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 LRRC8AQ8IWT6 810 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 OR8K3Q8NH51 312 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 TCP10LQ8TDR4 215 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 RBPMSQ93062 196 aaKnown RBP1.77□□□□□ -2.13
LTN1-206ENST00000486427 TOP1MTQ969P6 601 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 Q96MT0 163 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 CYP3A43Q9HB55 503 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 OR2S2Q9NQN1 319 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms