RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 BHLHA15Q7RTS1 189 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 GLCCI1Q86VQ1 547 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 DMRTC2Q8IXT2 367 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 CHST4Q8NCG5 386 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 TMEM104Q8NE00 496 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 AQP3Q92482 292 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 RNASE6Q93091 150 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 SEH1LQ96EE3 360 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 CACNG6Q9BXT2 260 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 MOV10Q9HCE1 1003 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 MRPL15Q9P015 296 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF107Q9UII5 783 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 PKDREJQ9NTG1 2253 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 A0A1W2PR80 420 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF850A8MQ14 1090 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 MT-ND4P03905 459 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 TCRBP04435 133 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 GIFP27352 417 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 BTG1P62324 171 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 GUCA2AQ02747 115 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 HLXQ14774 488 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 FBXL19-AS1Q494R0 122 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 UNQ6126/PRO20091Q6UXV3 157 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 Q6ZTK2 550 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 RFPL4BQ6ZWI9 263 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 C1QL2Q7Z5L3 287 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 UPRTQ96BW1 309 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 PAPOLGQ9BWT3 736 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 PIGMQ9H3S5 423 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 BANF2Q9H503 90 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 PCDHB16Q9NRJ7 776 aa12.53□□□□□ -0.4
POLR2J3-204ENST00000486319 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 CD300LBA8K4G0 201 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 SMPD2O60906 423 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 DHFRP00374 187 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 MGMTP16455 207 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 SERPINA2P20848 420 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 CPT2P23786 658 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 PRDX4Q13162 271 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 ARL6IP1Q15041 203 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 CDNFQ49AH0 187 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 FBXW12Q6X9E4 464 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 ASCL4Q6XD76 172 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 ZDHHC23Q8IYP9 409 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF295-AS1Q8N0V1 137 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 FAM169BQ8N8A8 192 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 PXT1Q8NFP0 134 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 NICN1Q9BSH3 213 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 TM2D1Q9BX74 207 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 SELENOIQ9C0D9 397 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 POFUT1Q9H488 388 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 JKAMPQ9P055 326 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 MPC1Q9Y5U8 109 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 CACNA1DQ01668 2161 aa12.52□□□□□ -0.4
POLR2J3-204ENST00000486319 IGKV1-27A0A075B6S5 117 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 A0A1W2PP11 408 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 TMEM235A6NFC5 223 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 OR5H1A6NKK0 313 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 ANKRD30BLA7E2S9 258 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 CELA3BP08861 270 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 AKAIN1P0CW23 69 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 TUBG1P23258 451 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 IL32P24001 234 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 SSTR2P30874 369 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 TAS2R19P59542 299 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 SNTB1Q13884 538 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 RSU1Q15404 277 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 TATDN3Q17R31 274 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 C1QTNF12Q5T7M4 302 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 BTN2A1Q7KYR7 527 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 MYPOPQ86VE0 399 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 TMEM229BQ8NBD8 167 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 RAB3CQ96E17 227 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 HIST1H2AAQ96QV6 131 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 TUBG2Q9NRH3 451 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 GPR160Q9UJ42 338 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 MAST4O15021 2626 aa12.52□□□□□ -0.41
POLR2J3-204ENST00000486319 A0A0A6YYD4 124 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 MSTNO14793 375 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 GTF2F2P13984 249 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 HLA-DMAP28067 261 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 434.3 ms