RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 FAM53BQ14153 422 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 HNRNPA1L2Q32P51 320 aaKnown RBP1.37□□□□□ -2.19
GCFC2-209ENST00000486016 NDUFAF6Q330K2 333 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 TTC32Q5I0X7 151 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 SPIN3Q5JUX0 258 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 ZNF678Q5SXM1 525 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 FAM27D1Q5T7N8 215 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 DUPD1Q68J44 220 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 THOC7Q6I9Y2 204 aaKnown RBP1.37□□□□□ -2.19
GCFC2-209ENST00000486016 RNF10Q8N5U6 811 aaKnown RBP1.37□□□□□ -2.19
GCFC2-209ENST00000486016 OR1P1Q8NH06 330 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 ZNF420Q8TAQ5 688 aaPredicted RBP1.37□□□□□ -2.19
GCFC2-209ENST00000486016 ZFAND1Q8TCF1 268 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 HGDQ93099 445 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 FAM131CQ96AQ9 280 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 RNF170Q96K19 258 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 TSNAXQ99598 290 aaKnown RBP1.37□□□□□ -2.19
GCFC2-209ENST00000486016 C20orf144Q9BQM9 153 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 ZNF649Q9BS31 505 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 C1orf50Q9BV19 199 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 MS4A8Q9BY19 250 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 TBL1XR1Q9BZK7 514 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 SND1-IT1Q9HBX3 110 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 C6orf50Q9HD87 102 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 IL37Q9NZH6 218 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 FLVCR2Q9UPI3 526 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 CFL2Q9Y281 166 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 ENPP4Q9Y6X5 453 aa1.37□□□□□ -2.19
GCFC2-209ENST00000486016 A0A0G2JMP0 313 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 A0A0X1KG70 313 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 ANKRD20A5PA0PJZ0 165 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 VGLL3A8MV65 326 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.36□□□□□ -2.19
GCFC2-209ENST00000486016 NDUFS5O43920 106 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 OR5AL1P0C617 328 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 P0C880 135 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 CD9P21926 228 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 MPIP34949 423 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 TAS2R60P59551 318 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 IFFO1Q0D2I5 559 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 STK38Q15208 465 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 MAPRE2Q15555 327 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 FBXL19-AS1Q494R0 122 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 CDNFQ49AH0 187 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 CAVIN4Q5BKX8 364 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 TMEM136Q6ZRR5 245 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 DAZ4Q86SG3 579 aaKnown RBP1.36□□□□□ -2.19
GCFC2-209ENST00000486016 PDPNQ86YL7 162 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 C1orf64Q8NEQ6 169 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 SLC26A10Q8NG04 563 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 OR52K1Q8NGK4 314 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 NDNFQ8TB73 568 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 DERL3Q96Q80 235 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 TM6SF2Q9BZW4 377 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 LHX5Q9H2C1 402 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 DAZ1Q9NQZ3 744 aaKnown RBP1.36□□□□□ -2.19
GCFC2-209ENST00000486016 TFR2Q9UP52 801 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 ORC6Q9Y5N6 252 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 AQRO60306 1485 aaKnown RBP eCLIP1.36□□□□□ -2.19
GCFC2-209ENST00000486016 RPRD2Q5VT52 1461 aaKnown RBP1.36□□□□□ -2.19
GCFC2-209ENST00000486016 ELP1O95163 1332 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 C2orf16Q68DN1 1984 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 SCN4AP35499 1836 aa1.36□□□□□ -2.19
GCFC2-209ENST00000486016 TNIKQ9UKE5 1360 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 SIGLEC1Q9BZZ2 1709 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 NPHP4O75161 1426 aaPredicted RBP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 TRAV8-7A0A075B6U6 113 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 FAM240AA0A1B0GVK7 77 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 SEC14L6B5MCN3 397 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 M0R1B8 84 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 RFXANKO14593 260 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 GATCO43716 136 aaKnown RBP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 ALOX12BO75342 701 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 CSTAP01040 98 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 IGHV1-46P01743 117 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 IGLV7-43P04211 117 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 RHOCP08134 193 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 OR4Q2P0C623 313 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 HLA-GP17693 338 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 PTNP21246 168 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 HTR2CP28335 458 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 TGM4P49221 684 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 PSMB2P49721 201 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 RGS6P49758 472 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 CARD18P57730 90 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 RPS11P62280 158 aaKnown RBP eCLIP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 IL5RAQ01344 420 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 FLI1Q01543 452 aaPredicted RBP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 LAMTOR4Q0VGL1 99 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 DYNC1I2Q13409 638 aaKnown RBP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 PMVKQ15126 192 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 TAL2Q16559 108 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 FAM104BQ5XKR9 115 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 SLC25A25Q6KCM7 469 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 FAM131AQ6UXB0 335 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 SETD3Q86TU7 594 aaPredicted RBP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 SGPP2Q8IWX5 399 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 ASCC1Q8N9N2 400 aaKnown RBP1.35□□□□□ -2.19
GCFC2-209ENST00000486016 ZNF680Q8NEM1 530 aa1.35□□□□□ -2.19
GCFC2-209ENST00000486016 OR13C9Q8NGT0 318 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms