RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SMURF1Q9HCE7 757 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 S100A14Q9HCY8 104 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 NLKQ9UBE8 527 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 DNAJB11Q9UBS4 358 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 ZNF222Q9UK12 451 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 KIAA2026Q5HYC2 2103 aa5.78□□□□□ -1.48
VPS50-218ENST00000485994 TRRAPQ9Y4A5 3859 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 IGKV1D-17A0A075B6S4 117 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 A0A1B0GVI7 797 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 SAC3D1A6NKF1 404 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 POM121CA8CG34 1229 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 M0R129 80 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 M0R1W7 72 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 EI24O14681 340 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 MAGEB4O15481 346 aaPredicted RBP5.77□□□□□ -1.49
VPS50-218ENST00000485994 ENTPD6O75354 484 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 RHBDL1O75783 438 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ALX3O95076 343 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 SERPINA3P01011 423 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 FAHP16930 419 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 GLRA1P23415 457 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 CFPP27918 469 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ATP6V1E1P36543 226 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ARF6P62330 175 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ACTC1P68032 377 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ACTA1P68133 377 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 IL13RA1P78552 427 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 HOXA4Q00056 320 aaPredicted RBP5.77□□□□□ -1.49
VPS50-218ENST00000485994 ZNF85Q03923 595 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 MFGE8Q08431 387 aaPredicted RBP5.77□□□□□ -1.49
VPS50-218ENST00000485994 IL24Q13007 206 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 BAMBIQ13145 260 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 SLC9A3R2Q15599 337 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 CEP78Q5JTW2 689 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 BCL2L15Q5TBC7 163 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 TMEM244Q5VVB8 128 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 LPCAT4Q643R3 524 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ACP7Q6ZNF0 438 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ZBTB49Q6ZSB9 765 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 KCTD8Q6ZWB6 473 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 UTS2BQ765I0 119 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 CBR4Q8N4T8 237 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ZNF561Q8N587 486 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 ACBD7Q8N6N7 88 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 DNAAF1Q8NEP3 725 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 OR5T2Q8NGG2 359 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 HAVCR2Q8TDQ0 301 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 GATAD2BQ8WXI9 593 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 C22orf15Q8WYQ4 148 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 PP6455Q8WZ26 134 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 TNFRSF14Q92956 283 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 SLC25A28Q96A46 364 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 TMIGD2Q96BF3 282 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 SEH1LQ96EE3 360 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 MRPL48Q96GC5 212 aaKnown RBP5.77□□□□□ -1.49
VPS50-218ENST00000485994 Q96MT0 163 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 GAFA1Q96PS6 74 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 SLC29A1Q99808 456 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 PKIBQ9C010 78 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 WDR13Q9H1Z4 485 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 RIBC2Q9H4K1 309 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 C8orf4Q9NR00 106 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 IMPAD1Q9NX62 359 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 POLDIP2Q9Y2S7 368 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 MAB21L2Q9Y586 359 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 MMP24Q9Y5R2 645 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 POMT1Q9Y6A1 747 aa5.77□□□□□ -1.49
VPS50-218ENST00000485994 IGHV3OR15-7A0A075B7D8 119 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 TRBV23-1A0A0A0MS06 115 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 TRAV40A0A0B4J280 105 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 IGHV1-69DA0A0B4J2H0 117 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 A0A1B0GUS0 222 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 LOC100130705A0A1B0GUX0 176 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 DNAJC9-AS1A6NH13 148 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 J3QT63 122 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 SYT7O43581 403 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 GATBO75879 557 aaKnown RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 IGHV1-69P01742 117 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 MT-ND2P03891 347 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 UBCP0CG48 685 aaKnown RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 HAAOP46952 286 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 UBE2E1P51965 193 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 RAB40BQ12829 278 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 MRPL28Q13084 256 aaKnown RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 GALEQ14376 348 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 UBE2V2Q15819 145 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 DGUOKQ16854 277 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 DEFB112Q30KQ8 113 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 KLHL22Q53GT1 634 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 PLCXD3Q63HM9 321 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 HAGHLQ6PII5 290 aaPredicted RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 LDLRAD3Q86YD5 345 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 ENTHD1Q8IYW4 607 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 CMTM4Q8IZR5 234 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 SYS1Q8N2H4 156 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 PQLC1Q8N2U9 271 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 FAM216BQ8N7L0 139 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 Q8N7P7 452 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 OR10H4Q8NGA5 316 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 OR2G2Q8NGZ5 317 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms