RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 C2orf68Q2NKX9 166 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 SMIM21Q3B7S5 101 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 CLVS2Q5SYC1 327 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 MEPCEQ7L2J0 689 aaKnown RBP9.33□□□□□ -0.92
SCFD1-206ENST00000484733 SPATA24Q86W54 205 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 FAM185AQ8N0U4 392 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 CD177Q8N6Q3 437 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 UTP4Q969X6 686 aaKnown RBP9.33□□□□□ -0.92
SCFD1-206ENST00000484733 CNN2Q99439 309 aaKnown RBP9.33□□□□□ -0.92
SCFD1-206ENST00000484733 SSX3Q99909 188 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 PRRG3Q9BZD7 231 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 RAB18Q9NP72 206 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 C19orf12Q9NSK7 152 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 PQLC2LA1A4F0 135 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 RFPL4AA6NLU0 287 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 RFPL4AL1F8VTS6 287 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 PSMD9O00233 223 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 TSPAN15O95858 294 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 MRPL3P09001 348 aaKnown RBP9.33□□□□□ -0.92
SCFD1-206ENST00000484733 FAHP16930 419 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 PRDX2P32119 198 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 DAPP51397 102 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 EGR3Q06889 387 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 HERPUD1Q15011 391 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 PTGES3Q15185 160 aaKnown RBP9.33□□□□□ -0.92
SCFD1-206ENST00000484733 LRRC75BQ2VPJ9 315 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 ELMOD2Q8IZ81 293 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 C11orf42Q8N5U0 333 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 PPA2Q9H2U2 334 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 HES4Q9HCC6 221 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 POLDIP2Q9Y2S7 368 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 R4GMQ9 66 aa9.33□□□□□ -0.92
SCFD1-206ENST00000484733 A0A0G2JK05 382 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 H3BUX3 64 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 PRKYO43930 277 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 MPZP25189 248 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 EFNB2P52799 333 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 MFGE8Q08431 387 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-206ENST00000484733 AADACL4Q5VUY2 407 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 TMEM200BQ69YZ2 307 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 MKXQ8IYA7 352 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 OR14K1Q8NGZ2 314 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 PPP1R14AQ96A00 147 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 NRIP2Q9BQI9 281 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 USE1Q9NZ43 259 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 A0A1B0GTI1 187 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 hCG_1809904A0A1W2PP81 198 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 A0A1W2PPE2 198 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 A0A1W2PR64 198 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 A0A1W2PRV1 198 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 LOC110117498-PIK3R3F6TDL0 507 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 SLC1A7O00341 560 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 GYG2O15488 501 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 SYNGR1O43759 233 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 ANGPTL7O43827 346 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 GABRA5P31644 462 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 CAPZA1P52907 286 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 RPL31P62899 125 aaKnown RBP9.32□□□□□ -0.92
SCFD1-206ENST00000484733 SLX4IPQ5VYV7 408 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 NXNL2Q5VZ03 156 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 ZNF322Q6U7Q0 402 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-206ENST00000484733 SLC35F2Q8IXU6 374 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 OR51G2Q8NGK0 314 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 C17orf50Q8WW18 174 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 PKIBQ9C010 78 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 CLN6Q9NWW5 311 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 OR52A1Q9UKL2 312 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 IKZF2Q9UKS7 526 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCFD1-206ENST00000484733 POMPQ9Y244 141 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 SNX5Q9Y5X3 404 aa9.32□□□□□ -0.92
SCFD1-206ENST00000484733 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 CSF1P09603 554 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 CCL1P22362 96 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 ERVFRD-1P60508 538 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 ERVK11-1P61568 191 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 C12orf73Q69YU5 71 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 CCDC54Q8NEL0 328 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 OR2T27Q8NH04 317 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 TMEM163Q8TC26 289 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 CFHR4Q92496 578 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 APOL4Q9BPW4 351 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 SEBOXQ9HB31 216 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-206ENST00000484733 ADGRL4Q9HBW9 690 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 GPR173Q9NS66 373 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 H2AFY2Q9P0M6 372 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-206ENST00000484733 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 ZAR1LA6NP61 321 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 C17orf98A8MV24 154 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 RBP4P02753 201 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 HAAOP46952 286 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 DLX6P56179 175 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 IL24Q13007 206 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 BCL2L15Q5TBC7 163 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 Q6ZTK2 550 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 OR4C13Q8NGP0 309 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 PPP1R35Q8TAP8 253 aa9.31□□□□□ -0.92
SCFD1-206ENST00000484733 PIFOQ8TCI5 191 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms