RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 TRIB3Q96RU7 358 aa1.33□□□□□ -2.2
CCDC66-219ENST00000484441 OR51B5Q9H339 312 aa1.33□□□□□ -2.2
CCDC66-219ENST00000484441 CD209Q9NNX6 404 aa1.33□□□□□ -2.2
CCDC66-219ENST00000484441 C20orf96Q9NUD7 363 aaPredicted RBP1.33□□□□□ -2.2
CCDC66-219ENST00000484441 GCNT4Q9P109 453 aa1.33□□□□□ -2.2
CCDC66-219ENST00000484441 NPHP4O75161 1426 aaPredicted RBP1.32□□□□□ -2.2
CCDC66-219ENST00000484441 GOLGA8JA6NMD2 632 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 ZBTB5O15062 677 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 SNRPAP09012 282 aaKnown RBP1.32□□□□□ -2.2
CCDC66-219ENST00000484441 GOLGA8HP0CJ92 632 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 HLA-GP17693 338 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 NDUFAF7Q7L592 441 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 OR5H2Q8NGV7 314 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 OPALINQ96PE5 141 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 CYP3A43Q9HB55 503 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 CCNB1IP1Q9NPC3 277 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 TMEM100Q9NV29 134 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 ENPP4Q9Y6X5 453 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 PLEKHG2Q9H7P9 1386 aa1.32□□□□□ -2.2
CCDC66-219ENST00000484441 DOCK10Q96BY6 2186 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 TRAV8-6A0A0B4J262 113 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 ZNF729A6NN14 1252 aaPredicted RBP1.31□□□□□ -2.2
CCDC66-219ENST00000484441 SMC2O95347 1197 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 TTC4O95801 387 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 NUDT2P50583 147 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 CCL23P55773 120 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 RPL18AQ02543 176 aaKnown RBP1.31□□□□□ -2.2
CCDC66-219ENST00000484441 GABRA6Q16445 453 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 BPIFB6Q8NFQ5 453 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 RAD51AP1Q96B01 352 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 THTPAQ9BU02 230 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 ARV1Q9H2C2 271 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 MRPS30Q9NP92 439 aaKnown RBP1.31□□□□□ -2.2
CCDC66-219ENST00000484441 MYEF2Q9P2K5 600 aaKnown RBP1.31□□□□□ -2.2
CCDC66-219ENST00000484441 PLXNA3P51805 1871 aa1.31□□□□□ -2.2
CCDC66-219ENST00000484441 C9JQL5 133 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 UPK1AO00322 258 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 TRGV3P03979 118 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 CATP04040 527 aaKnown RBP1.3□□□□□ -2.2
CCDC66-219ENST00000484441 KRT16P08779 473 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 HMGN5P82970 282 aaKnown RBP1.3□□□□□ -2.2
CCDC66-219ENST00000484441 BEX5Q5H9J7 111 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 FAM122BQ7Z309 247 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 LUZP2Q86TE4 346 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 OR8A1Q8NGG7 326 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.3□□□□□ -2.2
CCDC66-219ENST00000484441 FXYD5Q96DB9 178 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 C9orf72Q96LT7 481 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 ELOVL6Q9H5J4 265 aa1.3□□□□□ -2.2
CCDC66-219ENST00000484441 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
CCDC66-219ENST00000484441 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
CCDC66-219ENST00000484441 A0A1W2PRD5 423 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 G3V3Q6 166 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 SLC1A2P43004 574 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 RAB11AP62491 216 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 C5orf64Q2M2E5 130 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 KCTD16Q68DU8 428 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 TMEM53Q6P2H8 277 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 BZW1Q7L1Q6 419 aaKnown RBP1.29□□□□□ -2.2
CCDC66-219ENST00000484441 AMN1Q8IY45 258 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 SLC7A5P1Q8MH63 180 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 LINC00337Q8N6G1 96 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 OR8S1Q8NH09 359 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 TNFRSF14Q92956 283 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 SPACA5Q96QH8 159 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 DEFB129Q9H1M3 183 aa1.29□□□□□ -2.2
CCDC66-219ENST00000484441 TRGV4A0A0C4DH28 118 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 K7EPK0 472 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 MPDU1O75352 247 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 S1PR2O95136 353 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 UBCP0CG48 685 aaKnown RBP1.28□□□□□ -2.2
CCDC66-219ENST00000484441 P0DMU3 169 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 FAM231AP0DMU4 169 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 FAM231CP0DMU5 169 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 RAD51Q06609 339 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 OR10Z1Q8NGY1 313 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 FAM192AQ9GZU8 254 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 NMRK1Q9NWW6 199 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 ATG2BQ96BY7 2078 aa1.28□□□□□ -2.2
CCDC66-219ENST00000484441 IGHV3-21A0A0B4J1V1 117 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 IGHV3-43A0A0B4J1X8 118 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 HOXB8P17481 243 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-219ENST00000484441 GSTM3P21266 225 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 ZNF83P51522 516 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 MTPNP58546 118 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 SLC35A1P78382 337 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 FAM231DQ6ZW35 169 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 EIF3MQ7L2H7 374 aaKnown RBP1.27□□□□□ -2.21
CCDC66-219ENST00000484441 ZFP82Q8N141 532 aa1.27□□□□□ -2.21
CCDC66-219ENST00000484441 APOBEC3DQ96AK3 386 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-219ENST00000484441 A0A0B4J2C4 111 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 TEX46H3BTG2 121 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 ISLRO14498 428 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 FFAR1O14842 300 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 CLDN18P56856 261 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 ELOCQ15369 112 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 ZNF322Q6U7Q0 402 aaPredicted RBP1.26□□□□□ -2.21
CCDC66-219ENST00000484441 PRNTQ86SH4 94 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 ZNF567Q8N184 647 aa1.26□□□□□ -2.21
CCDC66-219ENST00000484441 CYB561A3Q8NBI2 242 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms