RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 SGK3Q96BR1 496 aa17.2■□□□□ 0.34
LIMS2-215ENST00000484252 ZNF2Q9BSG1 426 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-215ENST00000484252 CNTNAP3Q9BZ76 1288 aa17.2■□□□□ 0.34
LIMS2-215ENST00000484252 HSF4Q9ULV5 492 aa17.2■□□□□ 0.34
LIMS2-215ENST00000484252 PMS2P1A4D2B8 440 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 SFTPBP07988 381 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 TMEM225BP0DP42 221 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 GABRR1P24046 479 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 MTCP1P56278 107 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 BLOC1S1P78537 153 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 RBM39Q14498 530 aaKnown RBP17.19■□□□□ 0.34
LIMS2-215ENST00000484252 MST1LQ2TV78 715 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 DHRS7BQ6IAN0 325 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-215ENST00000484252 GALNTL5Q7Z4T8 443 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 DTX1Q86Y01 620 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 FBXO17Q96EF6 278 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 SMIM8Q96KF7 97 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
LIMS2-215ENST00000484252 C9J4A7 227 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 CBR3O75828 277 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 DBHP09172 617 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 CRYGSP22914 178 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 CNN3Q15417 329 aaKnown RBP17.19■□□□□ 0.34
LIMS2-215ENST00000484252 HLA-BQ31612 363 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 SNAI3Q3KNW1 292 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 RPUSD3Q6P087 351 aaKnown RBP17.19■□□□□ 0.34
LIMS2-215ENST00000484252 FNDC9Q8TBE3 224 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 SEC11CQ9BY50 192 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 RYDENQ9NUL5 291 aaKnown RBP17.19■□□□□ 0.34
LIMS2-215ENST00000484252 ANXA10Q9UJ72 324 aa17.19■□□□□ 0.34
LIMS2-215ENST00000484252 CRYM-AS1A6NIL9 109 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 YKT6O15498 198 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 SNAPINO95295 136 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 IFNA21P01568 189 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 HKR1P10072 659 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 DTYMKP23919 212 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 AKR1C2P52895 323 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 AKR1C1Q04828 323 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 SMCO1Q147U7 214 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 SWI5Q1ZZU3 235 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 IAH1Q2TAA2 248 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-215ENST00000484252 OR4A4PQ8NGN8 299 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 IFI44Q8TCB0 444 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 MR1Q95460 341 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 TAF9BQ9HBM6 251 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 TREM1Q9NP99 234 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 OR2S2Q9NQN1 319 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 GPR173Q9NS66 373 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 TUBD1Q9UJT1 453 aa17.18■□□□□ 0.34
LIMS2-215ENST00000484252 IGKV1D-8A0A087WSZ0 117 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 A0A0J9YW62 118 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 SGCEO43556 437 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 CST2P09228 141 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 RSU1Q15404 277 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 GUCA2BQ16661 112 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 LDLRAD3Q86YD5 345 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 GPR137CQ8N3F9 429 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 TMEM156Q8N614 296 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 JSRP1Q96MG2 331 aaPredicted RBP17.17■□□□□ 0.34
LIMS2-215ENST00000484252 TNFSF11O14788 317 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 CST4P01036 141 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 ZNF708P17019 499 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 IGSF11Q5DX21 431 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 RPS19BP1Q86WX3 136 aaKnown RBP17.17■□□□□ 0.34
LIMS2-215ENST00000484252 DMBX1Q8NFW5 382 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 GLYATL2Q8WU03 294 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 MICU1Q9BPX6 476 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 UQCC1Q9NVA1 299 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 PADI1Q9ULC6 663 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 HS3ST3B1Q9Y662 390 aa17.17■□□□□ 0.34
LIMS2-215ENST00000484252 ASCC3Q8N3C0 2202 aaKnown RBP17.17■□□□□ 0.34
LIMS2-215ENST00000484252 MYO15AQ9UKN7 3530 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SYNGR3O43761 229 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 GAPDHP04406 335 aaKnown RBP17.16■□□□□ 0.34
LIMS2-215ENST00000484252 CAV2P51636 162 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 MLF1P58340 268 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SKA3Q8IX90 412 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 REEP6Q96HR9 211 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 ACKR4Q9NPB9 350 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 NECAP2Q9NVZ3 263 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 ZNF391Q9UJN7 358 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SPEGQ15772 3267 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 K7EPK0 472 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 DEDDO75618 318 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 KLF7O75840 302 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SMIM6P0DI80 62 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 OR5H8P0DN80 308 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 RPL12P30050 165 aaKnown RBP17.16■□□□□ 0.34
LIMS2-215ENST00000484252 RAC3P60763 192 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SRSF3P84103 164 aaKnown RBP17.16■□□□□ 0.34
LIMS2-215ENST00000484252 TRA2AQ13595 282 aaKnown RBP eCLIP17.16■□□□□ 0.34
LIMS2-215ENST00000484252 AVPI1Q5T686 147 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 RPL7L1Q6DKI1 246 aaKnown RBP17.16■□□□□ 0.34
LIMS2-215ENST00000484252 H3F3CQ6NXT2 135 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 ASCL4Q6XD76 172 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 LHFPL2Q6ZUX7 228 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 FAM71E2Q8N5Q1 922 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 OR1F12Q8NHA8 337 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SFT2D1Q8WV19 159 aa17.16■□□□□ 0.34
LIMS2-215ENST00000484252 SRXN1Q9BYN0 137 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms