RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SLC7A11Q9UPY5 501 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 POLDIP2Q9Y2S7 368 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 INSIG2Q9Y5U4 225 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 MEGF8Q7Z7M0 2845 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 LOC107986453A0A1B0GWG9 222 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 ANKRD61A6NGH8 418 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 SRRM5B3KS81 715 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF732B4DXR9 585 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 CDIPTO14735 213 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 GPR37O15354 613 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 ALX3O95076 343 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 CLIC3O95833 236 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 LIMS3P0CW19 117 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 LIMS4P0CW20 117 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 IGHV4-38-2P0DP08 117 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 RPS2P15880 293 aaKnown RBP8.31□□□□□ -1.08
CPSF4-213ENST00000484112 FAHP16930 419 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 CNN3Q15417 329 aaKnown RBP8.31□□□□□ -1.08
CPSF4-213ENST00000484112 SMN1Q16637 294 aaKnown RBP8.31□□□□□ -1.08
CPSF4-213ENST00000484112 ATPAF1Q5TC12 328 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-213ENST00000484112 RNLSQ5VYX0 342 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 CD276Q5ZPR3 534 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 PLCXD3Q63HM9 321 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 RPL22L1Q6P5R6 122 aaKnown RBP8.31□□□□□ -1.08
CPSF4-213ENST00000484112 C16orf87Q6PH81 154 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 C17orf107Q6ZR85 190 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 KCTD8Q6ZWB6 473 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 MOB3CQ70IA8 216 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 UTS2BQ765I0 119 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 FAM90A1Q86YD7 464 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 SCCPDHQ8NBX0 429 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 DNAAF1Q8NEP3 725 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 OR52N1Q8NH53 320 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 LRRC29Q8WV35 223 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 PPP1R14AQ96A00 147 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 SSBP3Q9BWW4 388 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-213ENST00000484112 PKIBQ9C010 78 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 COMMD4Q9H0A8 199 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 ERVK-18Q9QC07 812 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 OR5V1Q9UGF6 321 aa8.31□□□□□ -1.08
CPSF4-213ENST00000484112 MDFIC2A0A1B0GVS7 189 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 PQLC2LA1A4F0 135 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 OR4C45A6NMZ5 311 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 CLDN34H7C241 214 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 TNFRSF13BO14836 293 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-213ENST00000484112 NOS1APO75052 506 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-213ENST00000484112 ECDO95905 644 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-213ENST00000484112 KNG1P01042 644 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 LIPFP07098 398 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 GNAO1P09471 354 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 PPIAL4GP0DN37 164 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 MPZP25189 248 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 KIR3DL2P43630 455 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 PITPNBP48739 271 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 GPM6AP51674 278 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 FUT6P51993 359 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 TAS2R43P59537 309 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 NANOS3P60323 173 aaKnown RBP8.3□□□□□ -1.08
CPSF4-213ENST00000484112 GNB2P62879 340 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 TUSC1Q2TAM9 212 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 CEP78Q5JTW2 689 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 SLC36A1Q7Z2H8 476 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF676Q8N7Q3 588 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 OR5AK2Q8NH90 309 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 NRG4Q8WWG1 115 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 SPSB1Q96BD6 273 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 ANKRD60Q9BZ19 345 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 BABAM2Q9NXR7 383 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 CLN8Q9UBY8 286 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
CPSF4-213ENST00000484112 TRBV2A0A0J9YWF9 115 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 IGHV3-64DA0A0J9YX35 117 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 J3QT63 122 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF205O95201 554 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 MT-ND2P03891 347 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 CRYBA1P05813 215 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF20P17024 532 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 PRKACBP22694 351 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 MYF6P23409 242 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 CD80P33681 288 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 AQP4P55087 323 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 PAX8Q06710 450 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 ST3GAL4Q11206 333 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 IL24Q13007 206 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 BTNL3Q6UXE8 466 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF826PQ6ZT77 177 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 STX19Q8N4C7 294 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 RPS4Y2Q8TD47 263 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 AQP3Q92482 292 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 GGHQ92820 318 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 RPL3LQ92901 407 aaKnown RBP8.29□□□□□ -1.08
CPSF4-213ENST00000484112 MYDGFQ969H8 173 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 CPNE2Q96FN4 548 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-213ENST00000484112 ISG20L2Q9H9L3 353 aaKnown RBP8.29□□□□□ -1.08
CPSF4-213ENST00000484112 RHOFQ9HBH0 211 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms