RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 UTP11Q9Y3A2 253 aaKnown RBP2.81□□□□□ -1.96
LRCH3-217ENST00000483442 TIMM10BQ9Y5J6 103 aa2.81□□□□□ -1.96
LRCH3-217ENST00000483442 TSSC4Q9Y5U2 329 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-217ENST00000483442 CEPT1Q9Y6K0 416 aa2.81□□□□□ -1.96
LRCH3-217ENST00000483442 V9GYY5 206 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-217ENST00000483442 RYR1P21817 5038 aa2.81□□□□□ -1.96
LRCH3-217ENST00000483442 SACSQ9NZJ4 4579 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IGHV3OR15-7A0A075B7D8 119 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IGKV1D-43A0A0B4J1Z2 117 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TRAV38-1A0A0B4J264 116 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IGHV4-28A0A0C4DH34 117 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 BLOC1S5-TXNDC5H3BN57 136 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 MLNRO43193 412 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 NDUFA2O43678 99 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TRMUO75648 421 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 OR2C1O95371 312 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SLC2A10O95528 541 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 PTBP3O95758 552 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CH25HO95992 272 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 LHBP01229 141 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IGHG1P01857 330 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HIST1H2ABP04908 130 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SERPINE1P05121 402 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 FGF4P08620 206 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 DUX4L4P0CJ87 422 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CPA3P15088 417 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ZNF182P17025 639 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TUBG1P23258 451 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HTR2AP28223 471 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 MC5RP33032 325 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SOX6P35712 828 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 GUCA1AP43080 201 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 VDAC2P45880 294 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SLC15A1P46059 708 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ETV1P50549 477 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CAPZA1P52907 286 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 GBX2P52951 348 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 F2RL1P55085 397 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 DNAJB13P59910 316 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 NAA20P61599 178 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ELF3P78545 371 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 MRPS34P82930 218 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ACSM1Q08AH1 577 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CASP8Q14790 479 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HIST3H3Q16695 136 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IGSF11Q5DX21 431 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CLEC12AQ5QGZ9 265 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 FAM27BQ5VT28 67 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ANXA8L1Q5VT79 327 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HHATQ5VTY9 493 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 FAM91A1Q658Y4 838 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ULK3Q6PHR2 472 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 METAP1DQ6UB28 335 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 C10orf99Q6UWK7 81 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ZYG11AQ6WRX3 759 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TIFABQ6ZNK6 161 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HIST3H2AQ7L7L0 130 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HAPLN4Q86UW8 402 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SLC30A8Q8IWU4 369 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CDH26Q8IXH8 852 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 Q8N2B8 174 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CLDN22Q8N7P3 220 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CCDC63Q8NA47 563 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 NPEPL1Q8NDH3 523 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 LY6G5BQ8NDX9 201 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 OR56B2PQ8NGI1 322 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 OR6S1Q8NH40 331 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SLC38A5Q8WUX1 472 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 DNAJA4Q8WW22 397 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 H1FXQ92522 213 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SLC7A6Q92536 515 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HIST1H2ACQ93077 130 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 NABP1Q96AH0 204 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TMEM68Q96MH6 324 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ZNF570Q96NI8 536 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CCL13Q99616 98 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 FAM110AQ9BQ89 295 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 ECSITQ9BQ95 431 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SRSF8Q9BRL6 282 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SLC25A33Q9BSK2 321 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 MRPL13Q9BYD1 178 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 C12orf10Q9HB07 376 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 CACYBPQ9HB71 228 aaKnown RBP2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TMEM27Q9HBJ8 222 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TUBG2Q9NRH3 451 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IL36RNQ9UBH0 155 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 EXTL2Q9UBQ6 330 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 EMCNQ9ULC0 261 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 IFT52Q9Y366 437 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SAR1BQ9Y6B6 198 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 SMAD5-AS1Q9Y6J3 95 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 TANC2Q9HCD6 1990 aa2.8□□□□□ -1.96
LRCH3-217ENST00000483442 HERC2O95714 4834 aa2.79□□□□□ -1.96
LRCH3-217ENST00000483442 A0A1W2PPM1 405 aa2.79□□□□□ -1.96
LRCH3-217ENST00000483442 A0A1W2PRG6 482 aa2.79□□□□□ -1.96
LRCH3-217ENST00000483442 OOEPA6NGQ2 149 aa2.79□□□□□ -1.96
LRCH3-217ENST00000483442 A8MZ25 164 aa2.79□□□□□ -1.96
LRCH3-217ENST00000483442 HNRNPCL2B2RXH8 293 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms