RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CCBE1Q6UXH8 406 aaPredicted RBP11.26□□□□□ -0.61
VARS-226ENST00000483275 CPOQ8IVL8 374 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 C11orf42Q8N5U0 333 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 PPP1R14AQ96A00 147 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 SLC7A6OSQ96CW6 309 aaPredicted RBP11.26□□□□□ -0.61
VARS-226ENST00000483275 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 FAM234AQ9H0X4 552 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 ABCB9Q9NP78 766 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 SERTAD4Q9NUC0 356 aa11.26□□□□□ -0.61
VARS-226ENST00000483275 AURKAIP1Q9NWT8 199 aaPredicted RBP11.26□□□□□ -0.61
VARS-226ENST00000483275 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 GSC2O15499 205 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 MTRF1O75570 445 aaKnown RBP11.25□□□□□ -0.61
VARS-226ENST00000483275 CST1P01037 141 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 RPS7P62081 194 aaKnown RBP11.25□□□□□ -0.61
VARS-226ENST00000483275 GINS1Q14691 196 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 CEACAM21Q3KPI0 293 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 TMEM236Q5W0B7 351 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 Q6ZS46 218 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 KRT77Q7Z794 578 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 HS3ST5Q8IZT8 346 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 PAPD5Q8NDF8 572 aaKnown RBP11.25□□□□□ -0.61
VARS-226ENST00000483275 OR51E1Q8TCB6 317 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 SGCDQ92629 289 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 PHF21AQ96BD5 680 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 R3HDM4Q96D70 268 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
VARS-226ENST00000483275 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 RANBP3Q9H6Z4 567 aaPredicted RBP11.25□□□□□ -0.61
VARS-226ENST00000483275 GPR84Q9NQS5 396 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 FAM206AQ9NX38 181 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 OR14J1Q9UGF5 321 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 LAMP5Q9UJQ1 280 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 PIGLQ9Y2B2 252 aa11.25□□□□□ -0.61
VARS-226ENST00000483275 A6NIN4 97 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 MAP2K3P46734 347 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 SMIM21Q3B7S5 101 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 OR5K1Q8NHB7 308 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 GIPC3Q8TF64 312 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 TEAD3Q99594 435 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 CHID1Q9BWS9 393 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 CDCA4Q9BXL8 241 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 CADM1Q9BY67 442 aaKnown RBP11.24□□□□□ -0.61
VARS-226ENST00000483275 RAB18Q9NP72 206 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 GPR173Q9NS66 373 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 GTF2A1LQ9UNN4 478 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 COPS3Q9UNS2 423 aa11.24□□□□□ -0.61
VARS-226ENST00000483275 TMEM269A0A1B0GVZ9 245 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 SLC1A7O00341 560 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 MAGEB4O15481 346 aaPredicted RBP11.23□□□□□ -0.61
VARS-226ENST00000483275 ARG1P05089 322 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 ALOX5APP20292 161 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 SLC2A5P22732 501 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 PRDX2P32119 198 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 LGALS4P56470 323 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 APOFQ13790 326 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 GK3PQ14409 553 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 C11orf88Q6PI97 169 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 CD300LDQ6UXZ3 194 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 PLEKHG7Q6ZR37 379 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 CCDC121Q6ZUS5 278 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 ADGRG5Q8IZF4 528 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 POC1AQ8NBT0 407 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 OR2T27Q8NH04 317 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 ZNF671Q8TAW3 534 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 CANT1Q8WVQ1 401 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 PBOV1Q9GZY1 135 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 USE1Q9NZ43 259 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 TCF19Q9Y242 345 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 POMPQ9Y244 141 aa11.23□□□□□ -0.61
VARS-226ENST00000483275 CCDC182A6NF36 153 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 OR5B21A6NL26 309 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 H3BSH0 61 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 M0R129 80 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 E2F6O75461 281 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 CIB2O75838 187 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 NXPH2O95156 264 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 PGA5P0DJD9 388 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 HAAOP46952 286 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 DLX6P56179 175 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 LOXL3P58215 753 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 ESRRGP62508 458 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 SSX2Q16385 188 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 AANATQ16613 207 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
VARS-226ENST00000483275 ASRGL1Q7L266 308 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 OR8B4Q96RC9 309 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 HEXA-AS1Q9H8Q6 139 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 ZNF281Q9Y2X9 895 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 TENM3Q9P273 2699 aa11.22□□□□□ -0.61
VARS-226ENST00000483275 KMT2CQ8NEZ4 4911 aaKnown RBP11.21□□□□□ -0.61
VARS-226ENST00000483275 A0A0U1RQV5 110 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 A6NDX4 124 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 J3QT63 122 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 PRODHO43272 600 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms