RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
COL16A1-213ENST00000482910 SEH1LQ96EE3 360 aa12.53□□□□□ -0.4
COL16A1-213ENST00000482910 MED30Q96HR3 178 aa12.53□□□□□ -0.4
COL16A1-213ENST00000482910 CCL13Q99616 98 aa12.53□□□□□ -0.4
COL16A1-213ENST00000482910 SUCNR1Q9BXA5 334 aa12.53□□□□□ -0.4
COL16A1-213ENST00000482910 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
COL16A1-213ENST00000482910 A6NIN4 97 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 TMEM212A6NML5 194 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 ZNF879B4DU55 563 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 SIGLEC5O15389 551 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 NDUFB3O43676 98 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 CCDC159P0C7I6 412 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 LIMS3P0CW19 117 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 LIMS4P0CW20 117 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.41
COL16A1-213ENST00000482910 BPIFB3P59826 476 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 IL13RA1P78552 427 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 IL24Q13007 206 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 SMIM21Q3B7S5 101 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 LRRC10Q5BKY1 277 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 ACP7Q6ZNF0 438 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 BTN2A1Q7KYR7 527 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 RDH10Q8IZV5 341 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 JMJD8Q96S16 334 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 NRIP2Q9BQI9 281 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 ISG20L2Q9H9L3 353 aaKnown RBP12.52□□□□□ -0.41
COL16A1-213ENST00000482910 RPUSD1Q9UJJ7 312 aaKnown RBP12.52□□□□□ -0.41
COL16A1-213ENST00000482910 ZNF222Q9UK12 451 aa12.52□□□□□ -0.41
COL16A1-213ENST00000482910 CAB39Q9Y376 341 aaPredicted RBP12.52□□□□□ -0.41
COL16A1-213ENST00000482910 H0YJX3 145 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 SYNGR1O43759 233 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 PLATP00750 562 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 PSG2P11465 335 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 CAV3P56539 151 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 HILS1P60008 231 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 GMFBP60983 142 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 FGF12P61328 243 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 SLC34A1Q06495 639 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 KRTAP24-1Q3LI83 254 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 CCDC58Q4VC31 144 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 C8orf59Q8N0T1 100 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-213ENST00000482910 BPIFB2Q8N4F0 458 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 LY6G5BQ8NDX9 201 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 OR5T2Q8NGG2 359 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 C8orf46Q8TAG6 207 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 FBLIM1Q8WUP2 373 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 ST8SIA4Q92187 359 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-213ENST00000482910 BORCS8Q96FH0 119 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 SDSLQ96GA7 329 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 GAFA1Q96PS6 74 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 RASSF4Q9H2L5 321 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 HES4Q9HCC6 221 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
COL16A1-213ENST00000482910 DIMT1Q9UNQ2 313 aaKnown RBP12.51□□□□□ -0.41
COL16A1-213ENST00000482910 EXOSC1Q9Y3B2 195 aaKnown RBP12.51□□□□□ -0.41
COL16A1-213ENST00000482910 IGKV1D-17A0A075B6S4 117 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 A0A1B0GW55 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 FAM230AA0A1W2PPH8 454 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 H3BSH0 61 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 ALX3O95076 343 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 MT-ND2P03891 347 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L2P0CJ85 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L3P0CJ86 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L4P0CJ87 422 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L5P0CJ88 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L6P0CJ89 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L7P0CJ90 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 PIPP12273 146 aaPredicted RBP12.5□□□□□ -0.41
COL16A1-213ENST00000482910 MMP9P14780 707 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 ZNF20P17024 532 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 PRKACBP22694 351 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 ERVK11-1P61568 191 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 MED21Q13503 144 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4L9Q6RFH8 374 aaPredicted RBP12.5□□□□□ -0.41
COL16A1-213ENST00000482910 TMPRSS11AQ6ZMR5 421 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 TRMT10AQ8TBZ6 339 aaKnown RBP12.5□□□□□ -0.41
COL16A1-213ENST00000482910 RPS4Y2Q8TD47 263 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 FGGYQ96C11 551 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DCTN5Q9BTE1 182 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 COMMD4Q9H0A8 199 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 CNOT2Q9NZN8 540 aaKnown RBP12.5□□□□□ -0.41
COL16A1-213ENST00000482910 DUX4Q9UBX2 424 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 NKX1-2Q9UD57 310 aaPredicted RBP12.5□□□□□ -0.41
COL16A1-213ENST00000482910 KPTNQ9Y664 436 aa12.5□□□□□ -0.41
COL16A1-213ENST00000482910 IGKV1-27A0A075B6S5 117 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 IGKV1-9A0A0C4DH69 117 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 E9PI62 339 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 NXPH2O95156 264 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 ZFPL1O95159 310 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 VENTXO95231 258 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 GNAO1P09471 354 aa12.49□□□□□ -0.41
COL16A1-213ENST00000482910 ATF1P18846 271 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms