RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 NUP210LQ5VU65 1888 aa2.45□□□□□ -2.02
GTF3A-207ENST00000482655 FN1P02751 2386 aaKnown RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 NAV3Q8IVL0 2385 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 DOCK4Q8N1I0 1966 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TRAV25A0A0B4J276 109 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 A0A0D9SEW6 157 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 H3BQF6 201 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 KPNA3O00505 521 aaPredicted RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 PES1O00541 588 aaKnown RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TRAF3IP2O43734 574 aaPredicted RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 CDC40O60508 579 aaKnown RBP eCLIP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 ICOSLGO75144 302 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 SUPT3HO75486 399 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 CA11O75493 328 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 SRP72O76094 671 aaKnown RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 UTS2O95399 124 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 LCA5LO95447 670 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 HLA-DRAP01903 254 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 IGKV3-11P04433 115 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 FABP3P05413 133 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 FOLR1P15328 257 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 ZNF30P17039 623 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 RCC1P18754 421 aaPredicted RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TCN2P20062 427 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 RAB3BP20337 219 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 VSX2P58304 361 aaPredicted RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 MYL5Q02045 173 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 ADIGQ0VDE8 80 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 IFT88Q13099 833 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 IRF4Q15306 451 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 OR7A5Q15622 319 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 ZSCAN26Q16670 478 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TMEM183BQ1AE95 376 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 SPECC1LQ69YQ0 1117 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 STUMQ69YW2 141 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 CYB5R2Q6BCY4 276 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 IGFL3Q6UXB1 125 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 MBOAT1Q6ZNC8 495 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TEX43Q6ZNM6 134 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 ZNF493Q6ZR52 646 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 LINC00173Q6ZV60 143 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 NCCRP1Q6ZVX7 275 aaPredicted RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TAC4Q86UU9 113 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 UNC93AQ86WB7 457 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 TMEM183AQ8IXX5 376 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 PQLC3Q8N755 202 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 OR9G4Q8NGQ1 327 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 OR6K2Q8NGY2 324 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 OR4S2Q8NH73 311 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 UBA3Q8TBC4 463 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 OR8D1Q8WZ84 308 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 EEF1AKMT3Q96AZ1 226 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 CRLF2Q9HC73 371 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 SLC39A1Q9NY26 324 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 IFNKQ9P0W0 207 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 HS3ST2Q9Y278 367 aa2.44□□□□□ -2.02
GTF3A-207ENST00000482655 V9GYY5 206 aaPredicted RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 MDC1Q14676 2089 aaKnown RBP2.44□□□□□ -2.02
GTF3A-207ENST00000482655 IGLV11-55A0A075B6I3 123 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 KCNE1BA0A087WTH5 132 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 TRBV6-6A0A0A6YYG2 114 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 ARGFXA6NJG6 315 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 FAM166BA8MTA8 275 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 MKRN2OSH3BPM6 223 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 TEX46H3BTG2 121 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 SCAMP2O15127 329 aaKnown RBP2.43□□□□□ -2.02
GTF3A-207ENST00000482655 NUPL2O15504 423 aaKnown RBP2.43□□□□□ -2.02
GTF3A-207ENST00000482655 KLRC4O43908 158 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 ZNF861PO60384 105 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CLDN11O75508 207 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 LSM8O95777 96 aaKnown RBP2.43□□□□□ -2.02
GTF3A-207ENST00000482655 GYPCP04921 128 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 ARG1P05089 322 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 TPM1P09493 284 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CT45A6P0DMU7 189 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CT45A5P0DMU8 189 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CT45A7P0DMV0 189 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CD99P14209 185 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 ZNF32P17041 273 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CXCL5P42830 114 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 NCBP2P52298 156 aaKnown RBP eCLIP2.43□□□□□ -2.02
GTF3A-207ENST00000482655 ZNF133P52736 654 aaPredicted RBP2.43□□□□□ -2.02
GTF3A-207ENST00000482655 GFERP55789 205 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 SLC25A11Q02978 314 aaKnown RBP2.43□□□□□ -2.02
GTF3A-207ENST00000482655 RAD51Q06609 339 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 GINS1Q14691 196 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 QPRTQ15274 297 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 GOLGA7BQ2TAP0 167 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 PTPN20Q4JDL3 420 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CT45A1Q5HYN5 189 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 C22orf39Q6P5X5 142 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 WDR59Q6PJI9 974 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 NELFCDQ8IXH7 590 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 C12orf56Q8IXR9 622 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 MKXQ8IYA7 352 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 PRSS58Q8IYP2 241 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 MDS2Q8NDY4 140 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 OR5K2Q8NHB8 316 aa2.43□□□□□ -2.02
GTF3A-207ENST00000482655 CT45A3Q8NHU0 189 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms