RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NKAIN1Q4KMZ8 207 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 CPTPQ5TA50 214 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 TMEM136Q6ZRR5 245 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 FAM9CQ8IZT9 166 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 LINC00304Q8N9R0 145 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 CYB561A3Q8NBI2 242 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 OR1P1Q8NH06 330 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 TMIGD2Q96BF3 282 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 ATP6V1G3Q96LB4 118 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 Q96MT0 163 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 CATSPER2Q96P56 530 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 SIKE1Q9BRV8 207 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 PARVGQ9HBI0 331 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 RWDD2AQ9UIY3 292 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 SETD1AO15047 1707 aaKnown RBP2.83□□□□□ -1.96
SF3B1-210ENST00000482158 TRAV8-4A0A0B4J246 113 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 PLEKHA8P1O95397 391 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 ETHE1O95571 254 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 P01737 135 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 MAS1P04201 325 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 ZNF3P17036 446 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 S100A5P33763 92 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 GALR1P47211 349 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 MLF1P58340 268 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 SLC35B1P78383 322 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 ZNF678Q5SXM1 525 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 HHATQ5VTY9 493 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 MTERF4Q7Z6M4 381 aaKnown RBP2.83□□□□□ -1.96
SF3B1-210ENST00000482158 BBS7Q8IWZ6 715 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 MRPL48Q96GC5 212 aaKnown RBP2.83□□□□□ -1.96
SF3B1-210ENST00000482158 ARL5BQ96KC2 179 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 ZNF649Q9BS31 505 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 IL20Q9NYY1 176 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 IL37Q9NZH6 218 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 GMEB1Q9Y692 573 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 MYO3BQ8WXR4 1341 aa2.83□□□□□ -1.96
SF3B1-210ENST00000482158 SHROOM3Q8TF72 1996 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 TMEM72A0PK05 275 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 KDELR3O43731 214 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 MBP02144 154 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 ERFP50548 548 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 PLTPP55058 493 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 GRB2P62993 217 aaKnown RBP2.82□□□□□ -1.96
SF3B1-210ENST00000482158 C2orf54Q08AI8 447 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 ST3GAL4Q11206 333 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 BTN1A1Q13410 526 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 FBXL19-AS1Q494R0 122 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 CD302Q8IX05 232 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 OR4A15Q8NGL6 344 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 OR6K6Q8NGW6 343 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 OR51A7Q8NH64 312 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 ANKRD7Q92527 254 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 C20orf144Q9BQM9 153 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 ANGPTL4Q9BY76 406 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 HAUS4Q9H6D7 363 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 CHMP5Q9NZZ3 219 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 STK38LQ9Y2H1 464 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 C15orf41Q9Y2V0 281 aa2.82□□□□□ -1.96
SF3B1-210ENST00000482158 CLDN34H7C241 214 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 OTCP00480 354 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 PSMC5P62195 406 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 ATP6V1FQ16864 119 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 COMTD1Q86VU5 262 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 RNF10Q8N5U6 811 aaKnown RBP2.81□□□□□ -1.96
SF3B1-210ENST00000482158 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 SLC26A10Q8NG04 563 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 HGDQ93099 445 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 LRRC45Q96CN5 670 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 LRRC39Q96DD0 335 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 ADGRL1O94910 1474 aa2.81□□□□□ -1.96
SF3B1-210ENST00000482158 ZNF879B4DU55 563 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 HSBP1L1C9JCN9 74 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 IGKV1D-16P01601 117 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 COL8A2P25067 703 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 TGM4P49221 684 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 RPL31P62899 125 aaKnown RBP2.8□□□□□ -1.96
SF3B1-210ENST00000482158 LINC00303Q3SY05 128 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 FAM27D1Q5T7N8 215 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 PDPK2PQ6A1A2 396 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 ARHGAP18Q8N392 663 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 LINC00337Q8N6G1 96 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 ZNF420Q8TAQ5 688 aaPredicted RBP2.8□□□□□ -1.96
SF3B1-210ENST00000482158 ING5Q8WYH8 240 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 CENPNQ96H22 339 aaPredicted RBP2.8□□□□□ -1.96
SF3B1-210ENST00000482158 PDCD1LG2Q9BQ51 273 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 AGPAT3Q9NRZ7 376 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 RAB22AQ9UL26 194 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 TFR2Q9UP52 801 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 ENPP4Q9Y6X5 453 aa2.8□□□□□ -1.96
SF3B1-210ENST00000482158 ELP1O95163 1332 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 A0A0G2JMP0 313 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 A0A0X1KG70 313 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 NDUFS5O43920 106 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 FSTL3O95633 263 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 IVLP07476 585 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 MAP3K7CLP57077 242 aa2.79□□□□□ -1.96
SF3B1-210ENST00000482158 RPS11P62280 158 aaKnown RBP eCLIP2.79□□□□□ -1.96
SF3B1-210ENST00000482158 SARNPP82979 210 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms