RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 OR52A1Q9UKL2 312 aa15.17■□□□□ 0.02
CLK1-211ENST00000481641 SLC22A13Q9Y226 551 aa15.17■□□□□ 0.02
CLK1-211ENST00000481641 R4GMQ9 66 aa15.17■□□□□ 0.02
CLK1-211ENST00000481641 A0A1B0GTI1 187 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 ZNF670-ZNF695F2Z2N8 137 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 G3V2T6 193 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 H0YAE9 185 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 H3BSH0 61 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 MTRF1O75570 445 aaKnown RBP15.16■□□□□ 0.02
CLK1-211ENST00000481641 PAX6P26367 422 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 HAAOP46952 286 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 UBE2E1P51965 193 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 PROK1P58294 105 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 DEFA6Q01524 100 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 BCL2L15Q5TBC7 163 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 ZBTB37Q5TC79 503 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 NXNL2Q5VZ03 156 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 DHRS7BQ6IAN0 325 aaPredicted RBP15.16■□□□□ 0.02
CLK1-211ENST00000481641 ELMOD2Q8IZ81 293 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 ZSCAN4Q8NAM6 433 aaPredicted RBP15.16■□□□□ 0.02
CLK1-211ENST00000481641 POC1AQ8NBT0 407 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 VPREB3Q9UKI3 123 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 V9GYS6 101 aa15.16■□□□□ 0.02
CLK1-211ENST00000481641 SLC22A31A6NKX4 558 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 RPP14O95059 124 aaKnown RBP15.15■□□□□ 0.02
CLK1-211ENST00000481641 APOL3O95236 402 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 PAHP00439 452 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 ERVFRD-1P60508 538 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 BNIP1Q12981 228 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 BLMHQ13867 455 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 ODF4Q2M2E3 257 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 CLVS2Q5SYC1 327 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 KDM4DQ6B0I6 523 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 ASPHD2Q6ICH7 369 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 ASRGL1Q7L266 308 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 OR51G2Q8NGK0 314 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 OR14K1Q8NGZ2 314 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 LRTOMTQ8WZ04 291 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 RORBQ92753 470 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 PRRG3Q9BZD7 231 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 CLN6Q9NWW5 311 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 RASL12Q9NYN1 266 aa15.15■□□□□ 0.02
CLK1-211ENST00000481641 PQLC2LA1A4F0 135 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 BTBD17A6NE02 478 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 J3QT63 122 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 ANGPTL7O43827 346 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 CLPXO76031 633 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 PGA5P0DJD9 388 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 PRDX2P32119 198 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 POLR2IP36954 125 aaKnown RBP15.14■□□□□ 0.01
CLK1-211ENST00000481641 NCR3LG1Q68D85 454 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 TMEM42Q69YG0 159 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 ANGPTL5Q86XS5 388 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 MKXQ8IYA7 352 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 OR4M1Q8NGD0 313 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 ITFG2Q969R8 447 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 AJUBAQ96IF1 538 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 MOB1AQ9H8S9 216 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 OR14J1Q9UGF5 321 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 AP4S1Q9Y587 144 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 SNX5Q9Y5X3 404 aa15.14■□□□□ 0.01
CLK1-211ENST00000481641 TRBV23-1A0A0A0MS06 115 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 FASP25445 335 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 SMIM21Q3B7S5 101 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 MIDNQ504T8 468 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 TMEM200BQ69YZ2 307 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 ZNF573Q86YE8 665 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 CALHM1Q8IU99 346 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 YIPF7Q8N8F6 280 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 TRMT10AQ8TBZ6 339 aaKnown RBP15.13■□□□□ 0.01
CLK1-211ENST00000481641 MNTQ99583 582 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 CIB1Q99828 191 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 GABARAPL1Q9H0R8 117 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 PPA2Q9H2U2 334 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 C16orf95Q9H693 158 aa15.13■□□□□ 0.01
CLK1-211ENST00000481641 SF3B6Q9Y3B4 125 aaKnown RBP15.13■□□□□ 0.01
CLK1-211ENST00000481641 NOTCH1P46531 2555 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 H3BUX3 64 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 M0QZ24 198 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 DLGAP1O14490 977 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 NXPH2O95156 264 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 ACTR3P61158 418 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 RPL31P62899 125 aaKnown RBP15.12■□□□□ 0.01
CLK1-211ENST00000481641 EGR3Q06889 387 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 ACSM1Q08AH1 577 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 LY6EQ16553 131 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 ZDHHC13Q8IUH4 622 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 GID4Q8IVV7 300 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 BEND2Q8NDZ0 799 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 OR5D13Q8NGL4 314 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 OR2T27Q8NH04 317 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 RBM4BQ9BQ04 359 aaKnown RBP15.12■□□□□ 0.01
CLK1-211ENST00000481641 NRIP2Q9BQI9 281 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 TCF7L1Q9HCS4 588 aa15.12■□□□□ 0.01
CLK1-211ENST00000481641 FAM230AA0A1W2PPH8 454 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 A0A1W2PQL4 384 aaPredicted RBP15.11■□□□□ 0.01
CLK1-211ENST00000481641 ANKRD61A6NGH8 418 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 SLC1A7O00341 560 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 TIMM23O14925 209 aa15.11■□□□□ 0.01
CLK1-211ENST00000481641 NOS1APO75052 506 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms