RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 OR10Z1Q8NGY1 313 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 PHF21AQ96BD5 680 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 S100A16Q96FQ6 103 aaKnown RBP8.65□□□□□ -1.02
USP39-215ENST00000481409 SYT3Q9BQG1 590 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 EGLN1Q9GZT9 426 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 DIABLOQ9NR28 239 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.03
USP39-215ENST00000481409 PRR14LQ5THK1 2151 aa8.65□□□□□ -1.03
USP39-215ENST00000481409 ANKHD1Q8IWZ3 2542 aaKnown RBP8.64□□□□□ -1.03
USP39-215ENST00000481409 IGKV1-27A0A075B6S5 117 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SMIM30A4D0T7 59 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 CLDN25C9JDP6 229 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 TRAPPC2LH3BP13 241 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 CTDSP2O14595 271 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 LILRA1O75019 489 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 PAHP00439 452 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 VSIG8P0DPA2 414 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SNRPBP14678 240 aaKnown RBP8.64□□□□□ -1.03
USP39-215ENST00000481409 CPT2P23786 658 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 CD40LGP29965 261 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 TNFSF8P32971 234 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 OR3A4PP47883 348 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 PRSS12P56730 875 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 QRFPP83859 136 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 PITPNAQ00169 270 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 TLE4Q04727 773 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP39-215ENST00000481409 ZNF154Q13106 437 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SNTB1Q13884 538 aaKnown RBP8.64□□□□□ -1.03
USP39-215ENST00000481409 ZNF846Q147U1 533 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SWI5Q1ZZU3 235 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 ZNF181Q2M3W8 571 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 ALKBH6Q3KRA9 238 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 TMEM255AQ5JRV8 349 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 CRIP3Q6Q6R5 217 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 DTX2Q86UW9 622 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 FAM90A1Q86YD7 464 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SAMD12Q8N8I0 201 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 OR2Z1Q8NG97 314 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 OR51F2Q8NH61 342 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 LILRB1Q8NHL6 650 aaPredicted RBP8.64□□□□□ -1.03
USP39-215ENST00000481409 LGALS14Q8TCE9 139 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 NPRL2Q8WTW4 380 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 AQP3Q92482 292 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 ELMOD3Q96FG2 381 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 DIRAS2Q96HU8 199 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 TMEM59Q9BXS4 323 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 FN3KRPQ9HA64 309 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 SEBOXQ9HB31 216 aaPredicted RBP8.64□□□□□ -1.03
USP39-215ENST00000481409 CBLN4Q9NTU7 201 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 RHBDL2Q9NX52 303 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 RASL12Q9NYN1 266 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 FZR1Q9UM11 496 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 ING4Q9UNL4 249 aa8.64□□□□□ -1.03
USP39-215ENST00000481409 TMEM272A0A1B0GTI8 110 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 FAM25AB3EWG3 89 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 FAM25CB3EWG5 89 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 FAM25GB3EWG6 89 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 CDC14BO60729 498 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 HPGDSO60760 199 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 IGHV1-46P01743 117 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 COX6B1P14854 86 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 MRPS10P82664 201 aaKnown RBP8.63□□□□□ -1.03
USP39-215ENST00000481409 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
USP39-215ENST00000481409 MAB21L1Q13394 359 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 P2RY14Q15391 338 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 FIP1L1Q6UN15 594 aaKnown RBP8.63□□□□□ -1.03
USP39-215ENST00000481409 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 SLC25A26Q70HW3 274 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 LAX1Q8IWV1 398 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 SCCPDHQ8NBX0 429 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 OR56B1Q8NGI3 324 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 Q8TCH9 128 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 HPS1Q92902 700 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 FAM46BQ96A09 425 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 MEGF10Q96KG7 1140 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 C1orf147Q96MC9 270 aaPredicted RBP8.63□□□□□ -1.03
USP39-215ENST00000481409 SPACA5Q96QH8 159 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 TM2D1Q9BX74 207 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 MSL2Q9HCI7 577 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 DYNLRB1Q9NP97 96 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 MYEF2Q9P2K5 600 aaKnown RBP8.63□□□□□ -1.03
USP39-215ENST00000481409 PLEKHA6Q9Y2H5 1048 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 CADP27708 2225 aa8.63□□□□□ -1.03
USP39-215ENST00000481409 ZFYVE26Q68DK2 2539 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 ZNF462Q96JM2 2506 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 FABP12A6NFH5 140 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 ZSCAN5BA6NJL1 495 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 F5H5P2 479 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 H0YL77 283 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 CTDSPLO15194 276 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 XRCC3O43542 346 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 CTAG2O75638 210 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 FSTL3O95633 263 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 GLAP06280 429 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 INHBBP09529 407 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 ELK1P19419 428 aa8.62□□□□□ -1.03
USP39-215ENST00000481409 PMELP40967 661 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms