RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AGFG2O95081 481 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 ALKBH6Q3KRA9 238 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 MSI2Q96DH6 328 aaKnown RBP16.85■□□□□ 0.29
CCM2-214ENST00000481194 TP53TG5Q9Y2B4 290 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 LALBAP00709 142 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 NFYBP25208 207 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 F2RL1P55085 397 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 DEFB108BQ8NET1 73 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 KNTC1P50748 2209 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 A0A0G2JMM0 328 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 A0A1W2PPB8 328 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 A0A1W2PRS3 328 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 KIR3DP1A8MWS1 328 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 SUCLG1P53597 346 aaKnown RBP16.85■□□□□ 0.29
CCM2-214ENST00000481194 CELF2-AS1Q8N7Q2 184 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 FAM57AQ8TBR7 257 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 ARHGEF17Q96PE2 2063 aaPredicted RBP16.85■□□□□ 0.29
CCM2-214ENST00000481194 NANOS3P60323 173 aaKnown RBP16.85■□□□□ 0.29
CCM2-214ENST00000481194 UBE2MP61081 183 aaKnown RBP16.85■□□□□ 0.29
CCM2-214ENST00000481194 MPV17LQ2QL34 196 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 GPR137Q96N19 417 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 PARD6AQ9NPB6 346 aa16.85■□□□□ 0.29
CCM2-214ENST00000481194 KIF26AQ9ULI4 1882 aaPredicted RBP16.85■□□□□ 0.29
CCM2-214ENST00000481194 GPR12P47775 334 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 S1PR3Q99500 378 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 ZNF436Q9C0F3 470 aaPredicted RBP16.84■□□□□ 0.29
CCM2-214ENST00000481194 MS4A5Q9H3V2 200 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 NPIPB7O75200 414 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 TPT1P13693 172 aaKnown RBP16.84■□□□□ 0.29
CCM2-214ENST00000481194 ZDHHC22Q8N966 263 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 LAMP3Q9UQV4 416 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 MSTNO14793 375 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 NEURL1O76050 574 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 IFNA17P01571 189 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 CD200R1LQ6Q8B3 271 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 Q6ZT83 130 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 OR4C16Q8NGL9 310 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 SPACA3Q8IXA5 215 aa16.84■□□□□ 0.29
CCM2-214ENST00000481194 FCGR2CP31995 323 aa16.83■□□□□ 0.29
CCM2-214ENST00000481194 RTP5Q14D33 572 aa16.83■□□□□ 0.29
CCM2-214ENST00000481194 OR2AK2Q8NG84 335 aa16.83■□□□□ 0.29
CCM2-214ENST00000481194 ARHGAP5-AS1Q96IT6 56 aa16.83■□□□□ 0.29
CCM2-214ENST00000481194 DPCDQ9BVM2 203 aaPredicted RBP16.83■□□□□ 0.29
CCM2-214ENST00000481194 PPIL3Q9H2H8 161 aaKnown RBP16.83■□□□□ 0.29
CCM2-214ENST00000481194 ERRFI1Q9UJM3 462 aaPredicted RBP16.83■□□□□ 0.29
CCM2-214ENST00000481194 SEMA7AO75326 666 aa16.83■□□□□ 0.29
CCM2-214ENST00000481194 ABHD17AQ96GS6 310 aa16.83■□□□□ 0.29
CCM2-214ENST00000481194 ATP6V1G1O75348 118 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 RPS27AP62979 156 aaKnown RBP16.83■□□□□ 0.28
CCM2-214ENST00000481194 UBA52P62987 128 aaKnown RBP16.83■□□□□ 0.28
CCM2-214ENST00000481194 BAK1Q16611 211 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 PHLDA2Q53GA4 152 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 MFSD4AQ8N468 514 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 GLYATL2Q8WU03 294 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 MT-CO2P00403 227 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 GIPP09681 153 aaPredicted RBP16.83■□□□□ 0.28
CCM2-214ENST00000481194 LHX2P50458 406 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 TCTEX1D2Q8WW35 142 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 FAM206AQ9NX38 181 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 TRAV38-1A0A0B4J264 116 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 UCP2P55851 309 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 FAM76BQ5HYJ3 339 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 TERB2Q8NHR7 220 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 WDYHV1Q96HA8 205 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 SLC23A1Q9UHI7 598 aa16.83■□□□□ 0.28
CCM2-214ENST00000481194 C17orf51A8MQB3 221 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 SCAF4O95104 1147 aaKnown RBP16.82■□□□□ 0.28
CCM2-214ENST00000481194 CHRNB4P30926 498 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 S100A7P31151 101 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 CLDN18P56856 261 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 AKR1C8PQ5T2L2 129 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 PIP4P1Q86T03 277 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 TMEM200AQ86VY9 491 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 MAP6Q96JE9 813 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 FZR1Q9UM11 496 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 H7C2Y5 167 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 SPINK2P20155 84 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 FPR2P25090 351 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 SLC39A7Q92504 469 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 ZNF486Q96H40 463 aaPredicted RBP16.82■□□□□ 0.28
CCM2-214ENST00000481194 TAAR6Q96RI8 345 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 CA11O75493 328 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 IL5P05113 134 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 RAG2P55895 527 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 RTL8BQ17RB0 113 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 KCNMB2Q9Y691 235 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 C1QTNF12Q5T7M4 302 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 S100A7AQ86SG5 101 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 ZNF546Q86UE3 836 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 RFLNBQ8N5W9 214 aa16.82■□□□□ 0.28
CCM2-214ENST00000481194 LOC390937A0A1W2PQ73 354 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 IFNL4K9M1U5 179 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 SLC33A1O00400 549 aaPredicted RBP16.81■□□□□ 0.28
CCM2-214ENST00000481194 CELA3AP09093 270 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 ANXA7P20073 488 aaKnown RBP16.81■□□□□ 0.28
CCM2-214ENST00000481194 PGLYRP3Q96LB9 341 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 PECRQ9BY49 303 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 SEC16AO15027 2179 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 NGFP01138 241 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms