RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 OR10G9Q8NGN4 311 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 OR1N2Q8NGR9 330 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 OR2A1Q8NGT9 310 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 TMEM54Q969K7 222 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 RAD51AP1Q96B01 352 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 RNF185Q96GF1 192 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 TSNARE1Q96NA8 513 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 FOPNLQ96NB1 174 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 KCTD14Q9BQ13 255 aaPredicted RBP3.41□□□□□ -1.86
UPF3A-207ENST00000481131 ILKAPQ9H0C8 392 aaPredicted RBP3.41□□□□□ -1.86
UPF3A-207ENST00000481131 SPNS1Q9H2V7 528 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 CLMPQ9H6B4 373 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 SLC25A37Q9NYZ2 338 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 STOX2Q9P2F5 926 aaPredicted RBP3.41□□□□□ -1.86
UPF3A-207ENST00000481131 TAC3Q9UHF0 121 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 NUP50Q9UKX7 468 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 F11RQ9Y624 299 aaKnown RBP3.41□□□□□ -1.86
UPF3A-207ENST00000481131 CACNG2Q9Y698 323 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 MED13Q9UHV7 2174 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 PTPRQQ9UMZ3 2332 aa3.41□□□□□ -1.86
UPF3A-207ENST00000481131 URB1O60287 2271 aaKnown RBP3.4□□□□□ -1.86
UPF3A-207ENST00000481131 KMT2BQ9UMN6 2715 aaPredicted RBP3.4□□□□□ -1.86
UPF3A-207ENST00000481131 DSPP15924 2871 aaKnown RBP3.4□□□□□ -1.86
UPF3A-207ENST00000481131 A0A1B0GVI7 797 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 C2orf74A8MZ97 194 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 SUPT3HB4E1H0 165 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 SUPT3HO75486 399 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 RPN2P04844 631 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 C8GP07360 202 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 CSF3P09919 207 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 IGHV3-43DP0DP04 118 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 TROVE2P10155 538 aaKnown RBP eCLIP3.4□□□□□ -1.87
UPF3A-207ENST00000481131 NELFEP18615 380 aaKnown RBP3.4□□□□□ -1.87
UPF3A-207ENST00000481131 RPA3P35244 121 aaPredicted RBP3.4□□□□□ -1.87
UPF3A-207ENST00000481131 GABRA4P48169 554 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 RORCP51449 518 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF92Q03936 586 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 AQP6Q13520 282 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 ITPR1Q14643 2758 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 GUCA2BQ16661 112 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 ALKBH6Q3KRA9 238 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 ADNP2Q6IQ32 1131 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 TTC23LQ6PF05 361 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 AGTRAPQ6RW13 159 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 MCOLN3Q8TDD5 553 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 GPR151Q8TDV0 419 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM158Q8WZ71 300 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 DOCK10Q96BY6 2186 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 OR4K3Q96R72 315 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 CENPKQ9BS16 269 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 DERL2Q9GZP9 239 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 RACGAP1Q9H0H5 632 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 DNTTIP1Q9H147 329 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 PARVBQ9HBI1 364 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 POPDC3Q9HBV1 291 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 SLCO1B3Q9NPD5 702 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 SLC39A1Q9NY26 324 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 EURLQ9NYK6 297 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 BTRCQ9Y297 605 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 LOC400499M0QZD8 3231 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 NBEAQ8NFP9 2946 aa3.4□□□□□ -1.87
UPF3A-207ENST00000481131 MGAQ8IWI9 3026 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 A6NDX4 124 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 C4orf51C9J302 202 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 E7EQ34 232 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 PEX7O00628 323 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 PPP1R2P9O14990 202 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ZW10O43264 779 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 SPAG7O75391 227 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 KLHL2O95198 593 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 SNRPAP09012 282 aaKnown RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 NR2C1P13056 603 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 F8A1P23610 371 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 CRABP2P29373 138 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 CMPK1P30085 196 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 CDKN1BP46527 198 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 RFX3P48380 749 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 SERPINB9P50453 376 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 LHX2P50458 406 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 NCBP2P52298 156 aaKnown RBP eCLIP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF133P52736 654 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 VSX2P58304 361 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ARHGAP19Q14CB8 494 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 RFX4Q33E94 735 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 LY6G6FQ5SQ64 297 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 RAET1LQ5VY80 246 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 IGFL2Q6UWQ7 119 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 LINC00173Q6ZV60 143 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 C4orf33Q8N1A6 199 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 RNF175Q8N4F7 328 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 MREGQ8N565 214 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 SNX31Q8N9S9 440 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 Q8N9W7 124 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 OR7G2Q8NG99 324 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ACMSDQ8TDX5 336 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 STMN2Q93045 179 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 PRAP1Q96NZ9 151 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ATP5SQ99766 215 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms