RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 PSPHP78330 225 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ASPHQ12797 758 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 STX4Q12846 297 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 SLAMF1Q13291 335 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 FBXO48Q5FWF7 155 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 PDZK1Q5T2W1 519 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 OR4F3Q6IEY1 312 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 OR52E8Q6IFG1 317 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ADNP2Q6IQ32 1131 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ZYG11AQ6WRX3 759 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 HSDL2Q6YN16 418 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 CROCCP2Q86T23 111 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 CRLF3Q8IUI8 442 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ST13P4Q8IZP2 240 aaPredicted RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 OR4F6Q8NGB9 312 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 NUBPLQ8TB37 319 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ANKRD9Q96BM1 317 aaPredicted RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 PKNOX2Q96KN3 472 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 IL4I1Q96RQ9 567 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 MAPKAP1Q9BPZ7 522 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 SLC39A3Q9BRY0 314 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 MED18Q9BUE0 208 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 DEFB126Q9BYW3 111 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 OR51B5Q9H339 312 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ELOVL6Q9H5J4 265 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 RPF2Q9H7B2 306 aaKnown RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 B3GNT2Q9NY97 397 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 TMEM216Q9P0N5 145 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 OR1A1Q9P1Q5 309 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 KLF13Q9Y2Y9 288 aaPredicted RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 YARS2Q9Y2Z4 477 aaKnown RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 RNF11Q9Y3C5 154 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ASB4Q9Y574 426 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 STARD9Q9P2P6 4700 aa3.9□□□□□ -1.78
UPF3A-205ENST00000479712 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.78
UPF3A-205ENST00000479712 A0A0G2JN53 185 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 TRBV11-1A0A0K0K1C0 115 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 GOLGA6L10A6NI86 522 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 MANBAO00462 879 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 COPEO14579 308 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PLIN3O60664 434 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 HCN1O60741 890 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 EEDO75530 441 aaKnown RBP3.9□□□□□ -1.79
UPF3A-205ENST00000479712 REM1O75628 298 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 MYO1DO94832 1006 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 SUPT7LO94864 414 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 DIRAS1O95057 198 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 ETHE1O95571 254 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 MYL2P10916 166 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 RPS2P15880 293 aaKnown RBP3.9□□□□□ -1.79
UPF3A-205ENST00000479712 NCK1P16333 377 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 RPL13AP40429 203 aaKnown RBP3.9□□□□□ -1.79
UPF3A-205ENST00000479712 LEPP41159 167 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 CYB561P49447 251 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 SSR4P51571 173 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 VSNL1P62760 191 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 SPIN4Q56A73 249 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PHYHD1Q5SRE7 291 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 TTC19Q6DKK2 380 aaPredicted RBP3.9□□□□□ -1.79
UPF3A-205ENST00000479712 SLC48A1Q6P1K1 146 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 OPN5Q6U736 354 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 COMMD6Q7Z4G1 85 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 ZFP62Q8NB50 900 aaPredicted RBP3.9□□□□□ -1.79
UPF3A-205ENST00000479712 OR7G1Q8NGA0 311 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF721Q8TF20 911 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 TCTEX1D2Q8WW35 142 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 VSIG2Q96IQ7 327 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PAXXQ9BUH6 204 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 FAIM2Q9BWQ8 316 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PARD6BQ9BYG5 372 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 CHIAQ9BZP6 476 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 FANCFQ9NPI8 374 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF226Q9NYT6 803 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 TAS2R7Q9NYW3 318 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 VPS29Q9UBQ0 182 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF225Q9UK10 706 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF223Q9UK11 482 aaPredicted RBP3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PSME2Q9UL46 239 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 CFL2Q9Y281 166 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PIGLQ9Y2B2 252 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 PLLPQ9Y342 182 aa3.9□□□□□ -1.79
UPF3A-205ENST00000479712 SCN3AQ9NY46 2000 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 IGLV8-61A0A075B6I0 122 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 A0A1B0GWB2 263 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 TRDCB7Z8K6 153 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 CXCL13O43927 109 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 OR10H3O60404 316 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 FCMRO60667 390 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 AIFM1O95831 613 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 PDYNP01213 254 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 SHBGP04278 402 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 IFNA16P05015 189 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 FGF4P08620 206 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 NEFHP12036 1026 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 CPMP14384 443 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 CSNK2A2P19784 350 aaPredicted RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 HMOX2P30519 316 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 KIR2DS2P43631 304 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 TMED10P49755 219 aaKnown RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 DAP3P51398 398 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms