RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MAPK3P27361 379 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 PSMB9P28065 219 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 HSD11B1P28845 292 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 MTNR1AP48039 350 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 NUDT6P53370 316 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 GRB2P62993 217 aaKnown RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ACTC1P68032 377 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ACTA1P68133 377 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 EFNB1P98172 346 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 PSG4Q00888 419 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 TLE4Q04727 773 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 BSPH1Q075Z2 132 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ECH1Q13011 328 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 BTN1A1Q13410 526 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 EIF2B1Q14232 305 aaKnown RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ENDOGQ14249 297 aaKnown RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 GGTLC2Q14390 218 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 MEP1BQ16820 701 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 TATDN3Q17R31 274 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 NHLRC3Q5JS37 347 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ELFN2Q5R3F8 820 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SLC25A30Q5SVS4 291 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 AADACL4Q5VUY2 407 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 RNLSQ5VYX0 342 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 PYHIN1Q6K0P9 492 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SLC18B1Q6NT16 456 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 KCTD18Q6PI47 426 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 UQCC3Q6UW78 93 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SLC16A9Q7RTY1 509 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 DCXRQ7Z4W1 244 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SNX29P2Q8IUI4 249 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 LINC00346Q8IVM7 164 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 C1orf174Q8IYL3 243 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ENTHD1Q8IYW4 607 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 OR8H3Q8N146 312 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ACBD4Q8NC06 268 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 BBS1Q8NFJ9 593 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 OR51G2Q8NGK0 314 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 OR1F12Q8NHA8 337 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 AKR7LQ8NHP1 331 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 THEM6Q8WUY1 208 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ASB17Q8WXJ9 295 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 AP3S1Q92572 193 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 DVL3Q92997 716 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 FBXO17Q96EF6 278 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SNX22Q96L94 193 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF582Q96NG8 517 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ATF6BQ99941 703 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 COPS4Q9BT78 406 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 HCAR1Q9BXC0 346 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 REG4Q9BYZ8 158 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 WDR76Q9H967 626 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 UNKLQ9H9P5 680 aaKnown RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ELOVL3Q9HB03 270 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SDHAF2Q9NX18 166 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 HAO2Q9NYQ3 351 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 RDH8Q9NYR8 311 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 DNAJC27Q9NZQ0 273 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 RPL36Q9Y3U8 105 aaKnown RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 NPTNQ9Y639 398 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 A0A087WWL8 130 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 C5orf49A4QMS7 147 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 LINC00587B1AMM8 73 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 ENTPD6O75354 484 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 FADS2O95864 444 aaKnown RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 IL1AP01583 271 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 TFP02787 698 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 MRPL3P09001 348 aaKnown RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 MMP7P09237 267 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 CSF3P09919 207 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 H2BFMP0C1H6 154 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 OR2T7P0C7T2 308 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 ARSBP15848 533 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 TNFSF8P32971 234 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 NAA10P41227 235 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 RAD52P43351 418 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 TGM4P49221 684 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 RGS6P49758 472 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 UCP3P55916 312 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 SELENOVP59797 346 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 NAAAQ02083 359 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 FOXL1Q12952 345 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 EXOSC2Q13868 293 aaKnown RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 MAD2L1BPQ15013 274 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 CARTPTQ16568 116 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 PCK2Q16822 640 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 HFEQ30201 348 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 KLHL22Q53GT1 634 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 LINC01590Q5TEZ4 76 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 ADAM5Q6NVV9 412 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF774Q6NX45 483 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 CRIP3Q6Q6R5 217 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 DPY19L4Q7Z388 723 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 FAM220AQ7Z4H9 259 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 SLC35F2Q8IXU6 374 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 OR5L1Q8NGL2 311 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 OR2T27Q8NH04 317 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 OTOSQ8NHW6 89 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 RNASE11Q8TAA1 199 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms